RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 USP40Q9NVE5 1235 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 PTPN22Q9Y2R2 807 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 DAGLAQ9Y4D2 1042 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 SNCAIPQ9Y6H5 919 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 CETPP11597 493 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 ADORA1P30542 326 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 PHKA1P46020 1223 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 ZKSCAN2Q63HK3 967 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 CDC42EP5Q6NZY7 148 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 FAM151AQ8WW52 585 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 MEIS3Q99687 375 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 ARAP2Q8WZ64 1704 aa11.38□□□□□ -0.59
AC011228.1-201ENST00000439027 IRF6O14896 467 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 PRDX5P30044 214 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 INPP5BP32019 993 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 PPIL2Q13356 520 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 INTS3Q68E01 1043 aaKnown RBP11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 COPRSQ9NQ92 184 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 OTOFQ9HC10 1997 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
AC011228.1-201ENST00000439027 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 SEMA3EO15041 775 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 GNAI3P08754 354 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 TIMM10P62072 90 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 NFIAQ12857 509 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 KIF22Q14807 665 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 PRPF38BQ5VTL8 546 aaKnown RBP11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 CCDC102BQ68D86 513 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 CEP290O15078 2479 aa11.36□□□□□ -0.59
AC011228.1-201ENST00000439027 TRIM27P14373 513 aa11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 CAP1Q01518 475 aa11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 PPATQ06203 517 aa11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 DZIP1Q86YF9 867 aaKnown RBP11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 ZGPATQ8N5A5 531 aaKnown RBP11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 ARHGAP45Q92619 1136 aa11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 NEUROD6Q96NK8 337 aa11.35□□□□□ -0.59
AC011228.1-201ENST00000439027 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 TLR2O60603 784 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 MYCP01106 439 aaPredicted RBP11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 MS4A1P11836 297 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 RGS3P49796 1198 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 TFCP2Q12800 502 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 SLC9C1Q4G0N8 1177 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 GORABQ5T7V8 394 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 ZSCAN29Q8IWY8 852 aaPredicted RBP11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 FTSJ3Q8IY81 847 aaKnown RBP11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 XAGE2Q96GT9 111 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 PTCH2Q9Y6C5 1203 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
AC011228.1-201ENST00000439027 MYH13Q9UKX3 1938 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 RLBP1P12271 317 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 MVPQ14764 893 aaKnown RBP11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 NBPF11Q86T75 865 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 ZNF112Q9UJU3 913 aa11.33□□□□□ -0.6
AC011228.1-201ENST00000439027 HTTP42858 3142 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 PDHXO00330 501 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 GNAI2P04899 355 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 LACTBP83111 547 aaPredicted RBP11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 G3BP1Q13283 466 aaKnown RBP eCLIP11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 PICALMQ13492 652 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 SLC4A8Q2Y0W8 1093 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
AC011228.1-201ENST00000439027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
AC011228.1-201ENST00000439027 ENTPD3O75355 529 aa11.31□□□□□ -0.6
AC011228.1-201ENST00000439027 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
AC011228.1-201ENST00000439027 BTDP43251 543 aa11.31□□□□□ -0.6
AC011228.1-201ENST00000439027 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms