RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 MRS2Q9HD23 443 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 ZNF112Q9UJU3 913 aa10.4□□□□□ -0.74
CDH13-203ENST00000431540 MKI67P46013 3256 aaKnown RBP10.39□□□□□ -0.75
CDH13-203ENST00000431540 SNAP23O00161 211 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
CDH13-203ENST00000431540 SEMA3EO15041 775 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 PLIN1O60240 522 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
CDH13-203ENST00000431540 IFIT1P09914 478 aaKnown RBP10.39□□□□□ -0.75
CDH13-203ENST00000431540 GYG1P46976 350 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 VGLL4Q14135 290 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 SLC9C1Q4G0N8 1177 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 VGLL2Q8N8G2 317 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 FAM151AQ8WW52 585 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 BRI3BPQ8WY22 251 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 ZNF594Q96JF6 807 aaPredicted RBP10.39□□□□□ -0.75
CDH13-203ENST00000431540 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
CDH13-203ENST00000431540 CXCL11O14625 94 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 IGSF3O75054 1194 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
CDH13-203ENST00000431540 NBPF7P0C2Y1 421 aaPredicted RBP10.38□□□□□ -0.75
CDH13-203ENST00000431540 FGFR2P21802 821 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 LACTBP83111 547 aaPredicted RBP10.38□□□□□ -0.75
CDH13-203ENST00000431540 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
CDH13-203ENST00000431540 CCDC184Q52MB2 194 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 APOBEC3HQ6NTF7 200 aaKnown RBP10.38□□□□□ -0.75
CDH13-203ENST00000431540 ANKRD23Q86SG2 305 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 LPIN2Q92539 896 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 ZNF341Q9BYN7 854 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
CDH13-203ENST00000431540 SALL1Q9NSC2 1324 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 TCP10L2B9ZVM9 353 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
CDH13-203ENST00000431540 ZEB1P37275 1124 aaPredicted RBP10.37□□□□□ -0.75
CDH13-203ENST00000431540 MAP3K10Q02779 954 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 NOL9Q5SY16 702 aaKnown RBP10.37□□□□□ -0.75
CDH13-203ENST00000431540 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 C17orf99Q6UX52 265 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 ZGPATQ8N5A5 531 aaKnown RBP10.37□□□□□ -0.75
CDH13-203ENST00000431540 SUCLG2Q96I99 432 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 TMEM39BQ9GZU3 492 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 GNL3LQ9NVN8 582 aaKnown RBP10.37□□□□□ -0.75
CDH13-203ENST00000431540 FZD1Q9UP38 647 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
CDH13-203ENST00000431540 ZNF521Q96K83 1311 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 CIAO1O76071 339 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 THSD4Q6ZMP0 1018 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
CDH13-203ENST00000431540 USP44Q9H0E7 712 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 BICC1Q9H694 974 aaKnown RBP10.36□□□□□ -0.75
CDH13-203ENST00000431540 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 DOCK3Q8IZD9 2030 aa10.36□□□□□ -0.75
CDH13-203ENST00000431540 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
CDH13-203ENST00000431540 BTBD19C9JJ37 291 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 E9PSI1 815 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 EYA2O00167 538 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 IRF6O14896 467 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 ENTPD3O75355 529 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 SLC5A1P13866 664 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 EN2P19622 333 aaPredicted RBP10.35□□□□□ -0.75
CDH13-203ENST00000431540 SLC4A8Q2Y0W8 1093 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
CDH13-203ENST00000431540 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
CDH13-203ENST00000431540 ANKRD44Q8N8A2 993 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 WRNIP1Q96S55 665 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 IDI2Q9BXS1 227 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 TBC1D2Q9BYX2 928 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 SRRDQ9UH36 339 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 PTPRFP10586 1907 aa10.35□□□□□ -0.75
CDH13-203ENST00000431540 AOX1Q06278 1338 aa10.34□□□□□ -0.75
CDH13-203ENST00000431540 BCAMP50895 628 aa10.34□□□□□ -0.75
CDH13-203ENST00000431540 LRRC24Q50LG9 513 aa10.34□□□□□ -0.75
CDH13-203ENST00000431540 RNF25Q96BH1 459 aaPredicted RBP10.34□□□□□ -0.75
CDH13-203ENST00000431540 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
CDH13-203ENST00000431540 DENND2AQ9ULE3 1009 aa10.34□□□□□ -0.75
CDH13-203ENST00000431540 PTCH2Q9Y6C5 1203 aa10.34□□□□□ -0.75
CDH13-203ENST00000431540 A0A1W2PPC1 479 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 TBC1D12O60347 775 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 GJB1P08034 283 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 GJA8P48165 433 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 UBXN2AP68543 259 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 ZKSCAN4Q969J2 545 aaPredicted RBP10.33□□□□□ -0.76
CDH13-203ENST00000431540 HTATIP2Q9BUP3 242 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 CEP126Q9P2H0 1117 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 JAG2Q9Y219 1238 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 ADGRA2Q96PE1 1338 aa10.33□□□□□ -0.76
CDH13-203ENST00000431540 LDHBP07195 334 aaKnown RBP10.32□□□□□ -0.76
CDH13-203ENST00000431540 GRK4P32298 578 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms