RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 ELP1O95163 1332 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 ANGEL2Q5VTE6 544 aaKnown RBP11.35□□□□□ -0.59
NEDD1-203ENST00000429527 SASS6Q6UVJ0 657 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
NEDD1-203ENST00000429527 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 USP25Q9UHP3 1055 aa11.35□□□□□ -0.59
NEDD1-203ENST00000429527 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
NEDD1-203ENST00000429527 MYH7P12883 1935 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 CELF2O95319 508 aaKnown RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 RBM43Q6ZSC3 357 aaKnown RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 PRIMPOLQ96LW4 560 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 PALD1Q9ULE6 856 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 MSNP26038 577 aaKnown RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 GYG1P46976 350 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 PRPF40AO75400 957 aaKnown RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 TEPSINQ96N21 525 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
NEDD1-203ENST00000429527 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
NEDD1-203ENST00000429527 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-203ENST00000429527 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 C2orf69Q8N8R5 385 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 PIBF1Q8WXW3 757 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 CAPNS2Q96L46 248 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-203ENST00000429527 PNMA6EA0A0J9YXQ4 647 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 NOGQ13253 232 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 CCDC183Q5T5S1 534 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 ATAD5Q96QE3 1844 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 SNAP23O00161 211 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 SRGAP3O43295 1099 aa11.33□□□□□ -0.6
NEDD1-203ENST00000429527 CRKP46108 304 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 TNFAIP1Q13829 316 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 MFSD14BQ5SR56 506 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 KLHDC4Q8TBB5 520 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 ZNF70Q9UC06 446 aaPredicted RBP11.32□□□□□ -0.6
NEDD1-203ENST00000429527 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 UBE2HP62256 183 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 MYRIPQ8NFW9 859 aa11.32□□□□□ -0.6
NEDD1-203ENST00000429527 TPM3P06753 285 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 TM4SF4P48230 202 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 BCAMP50895 628 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 NEK4P51957 841 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 HOOK2Q96ED9 719 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 CTCFP49711 727 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 ZNF112Q9UJU3 913 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 SNX14Q9Y5W7 946 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 HSPA1AP0DMV8 641 aaKnown RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 HSPA1BP0DMV9 641 aaKnown RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 SYCP1Q15431 976 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 PRMT6Q96LA8 375 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
NEDD1-203ENST00000429527 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-203ENST00000429527 MYO1BO43795 1136 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 TFCP2Q12800 502 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 NOL9Q5SY16 702 aaKnown RBP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 PTPRFP10586 1907 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 A0A1B0GUL7 405 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 HTRA3P83110 453 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 KIAA0825Q8IV33 1275 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 XAGE2Q96GT9 111 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 TNNI3KQ59H18 835 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 IL25Q9H293 177 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 KCND1Q9NSA2 647 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
NEDD1-203ENST00000429527 FPGT-TNNI3KV9GXZ4 949 aa11.3□□□□□ -0.6
NEDD1-203ENST00000429527 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms