RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 PTPRAP18433 802 aa15.17■□□□□ 0.02
DDX39B-208ENST00000428098 GNAI1P63096 354 aa15.17■□□□□ 0.02
DDX39B-208ENST00000428098 NFIAQ12857 509 aa15.17■□□□□ 0.02
DDX39B-208ENST00000428098 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
DDX39B-208ENST00000428098 BDP1A6H8Y1 2624 aa15.17■□□□□ 0.02
DDX39B-208ENST00000428098 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 MAP3K21Q5TCX8 1036 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 HHIPL2Q6UWX4 724 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 LINS1Q8NG48 757 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 TRIB2Q92519 343 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 FAM122AQ96E09 287 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
DDX39B-208ENST00000428098 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
DDX39B-208ENST00000428098 SHHQ15465 462 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 LHX8Q68G74 356 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 CDC42EP5Q6NZY7 148 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 USP38Q8NB14 1042 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 MYH16Q9H6N6 1097 aa15.15■□□□□ 0.02
DDX39B-208ENST00000428098 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.15■□□□□ 0.02
DDX39B-208ENST00000428098 FAM110CQ1W6H9 321 aa15.14■□□□□ 0.01
DDX39B-208ENST00000428098 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
DDX39B-208ENST00000428098 TJAP1Q5JTD0 557 aa15.14■□□□□ 0.01
DDX39B-208ENST00000428098 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
DDX39B-208ENST00000428098 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
DDX39B-208ENST00000428098 SCYL3Q8IZE3 742 aa15.14■□□□□ 0.01
DDX39B-208ENST00000428098 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
DDX39B-208ENST00000428098 NCOR1O75376 2440 aa15.13■□□□□ 0.01
DDX39B-208ENST00000428098 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
DDX39B-208ENST00000428098 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
DDX39B-208ENST00000428098 FOSL2P15408 326 aa15.13■□□□□ 0.01
DDX39B-208ENST00000428098 CYP2B6P20813 491 aa15.13■□□□□ 0.01
DDX39B-208ENST00000428098 LBHD1Q9BQE6 289 aaPredicted RBP15.13■□□□□ 0.01
DDX39B-208ENST00000428098 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
DDX39B-208ENST00000428098 CHMP4AQ9BY43 222 aa15.13■□□□□ 0.01
DDX39B-208ENST00000428098 ATRNL1Q5VV63 1379 aa15.12■□□□□ 0.01
DDX39B-208ENST00000428098 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
DDX39B-208ENST00000428098 PICK1Q9NRD5 415 aa15.12■□□□□ 0.01
DDX39B-208ENST00000428098 AGTPBP1Q9UPW5 1226 aa15.12■□□□□ 0.01
DDX39B-208ENST00000428098 DAGLAQ9Y4D2 1042 aa15.12■□□□□ 0.01
DDX39B-208ENST00000428098 AK9Q5TCS8 1911 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 PLXNB2O15031 1838 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 TMEM265A0A087WTH1 108 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 APAF1O14727 1248 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 PEX10O60683 326 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
DDX39B-208ENST00000428098 CCND3P30281 292 aaPredicted RBP15.11■□□□□ 0.01
DDX39B-208ENST00000428098 CACNB2Q08289 660 aaPredicted RBP15.11■□□□□ 0.01
DDX39B-208ENST00000428098 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 FLIIQ13045 1269 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 VPS37DQ86XT2 251 aa15.11■□□□□ 0.01
DDX39B-208ENST00000428098 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
DDX39B-208ENST00000428098 DIXDC1Q155Q3 683 aa15.1■□□□□ 0.01
DDX39B-208ENST00000428098 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
DDX39B-208ENST00000428098 USP40Q9NVE5 1235 aa15.1■□□□□ 0.01
DDX39B-208ENST00000428098 SUGT1Q9Y2Z0 365 aa15.1■□□□□ 0.01
DDX39B-208ENST00000428098 PTPRFP10586 1907 aa15.09■□□□□ 0.01
DDX39B-208ENST00000428098 FKBP5Q13451 457 aaPredicted RBP15.09■□□□□ 0.01
DDX39B-208ENST00000428098 SENP6Q9GZR1 1112 aaPredicted RBP15.09■□□□□ 0.01
DDX39B-208ENST00000428098 F6X3S4 739 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 CTNND1O60716 968 aaKnown RBP15.08■□□□□ 0
DDX39B-208ENST00000428098 GCLCP48506 637 aaPredicted RBP15.08■□□□□ 0
DDX39B-208ENST00000428098 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
DDX39B-208ENST00000428098 SMAD3P84022 425 aaKnown RBP15.08■□□□□ 0
DDX39B-208ENST00000428098 RALBP1Q15311 655 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 CCL14Q16627 93 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 LRRC24Q50LG9 513 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 BEND3Q5T5X7 828 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 MAST3O60307 1309 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0
DDX39B-208ENST00000428098 XRCC5P13010 732 aaKnown RBP15.07■□□□□ 0
DDX39B-208ENST00000428098 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
DDX39B-208ENST00000428098 GRIN2CQ14957 1233 aa15.07■□□□□ 0
DDX39B-208ENST00000428098 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 08e-58■□□□□ 9.7
DDX39B-208ENST00000428098 CAVIN4Q5BKX8 364 aa15.07■□□□□ 0
DDX39B-208ENST00000428098 VGLL2Q8N8G2 317 aa15.07■□□□□ 0
DDX39B-208ENST00000428098 KAZALD1Q96I82 304 aa15.07■□□□□ 0
DDX39B-208ENST00000428098 ASCC2Q9H1I8 757 aaPredicted RBP15.07■□□□□ 0
DDX39B-208ENST00000428098 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
DDX39B-208ENST00000428098 DDTLA6NHG4 134 aaPredicted RBP15.06■□□□□ 0
DDX39B-208ENST00000428098 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
DDX39B-208ENST00000428098 USP6NLQ92738 828 aa15.06■□□□□ 0
DDX39B-208ENST00000428098 MORF4L1Q9UBU8 362 aa15.06■□□□□ 0
DDX39B-208ENST00000428098 PNMA3Q9UL41 463 aa15.06■□□□□ 0
DDX39B-208ENST00000428098 RGS3P49796 1198 aa15.05■□□□□ -0
DDX39B-208ENST00000428098 SPP2Q13103 211 aa15.05■□□□□ -0
DDX39B-208ENST00000428098 PROCA1Q8NCQ7 364 aaPredicted RBP15.05■□□□□ -0
DDX39B-208ENST00000428098 BADQ92934 168 aa15.05■□□□□ -0
DDX39B-208ENST00000428098 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
DDX39B-208ENST00000428098 GRM8O00222 908 aa15.04■□□□□ -0
DDX39B-208ENST00000428098 PDE8BO95263 885 aa15.04■□□□□ -0
DDX39B-208ENST00000428098 RTP1P59025 263 aa15.04■□□□□ -0
DDX39B-208ENST00000428098 NUDT12Q9BQG2 462 aa15.04■□□□□ -0
DDX39B-208ENST00000428098 TXNRD2Q9NNW7 524 aa15.04■□□□□ -0
DDX39B-208ENST00000428098 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
DDX39B-208ENST00000428098 PRDX5P30044 214 aa15.03■□□□□ -0
DDX39B-208ENST00000428098 HMGCS2P54868 508 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms