RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 TEPSINQ96N21 525 aa11.33□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MRIQ9BWK5 157 aa11.33□□□□□ -0.6
RFX3-AS1-202ENST00000427722 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
RFX3-AS1-202ENST00000427722 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
RFX3-AS1-202ENST00000427722 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
RFX3-AS1-202ENST00000427722 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MCAMP43121 646 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 TCP10Q12799 353 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MAP3K11Q16584 847 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 CDC42EP5Q6NZY7 148 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 GPR108Q9NPR9 543 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 DBNLQ9UJU6 430 aaKnown RBP11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 GAKO14976 1311 aa11.32□□□□□ -0.6
RFX3-AS1-202ENST00000427722 APBB1O00213 710 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 HMMRO75330 724 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 PPP1R37O75864 691 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MECOMQ03112 1051 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 NFIAQ12857 509 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 CCDC158Q5M9N0 1113 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 AACSQ86V21 672 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 CSRNP1Q96S65 589 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 CCDC8Q9H0W5 538 aaPredicted RBP11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 BCL11AQ9H165 835 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 USP2O75604 605 aaPredicted RBP11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 BTDP43251 543 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 WNK4Q96J92 1243 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 IL1RAPL2Q9NP60 686 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RNF186Q9NXI6 227 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SAGE1Q9NXZ1 904 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MROH7-TTC4A0A0A0MT08 1334 aa11.3□□□□□ -0.6
RFX3-AS1-202ENST00000427722 TRPA1O75762 1119 aa11.29□□□□□ -0.6
RFX3-AS1-202ENST00000427722 SREBF2Q12772 1141 aa11.29□□□□□ -0.6
RFX3-AS1-202ENST00000427722 VGLL4Q14135 290 aa11.29□□□□□ -0.6
RFX3-AS1-202ENST00000427722 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
RFX3-AS1-202ENST00000427722 WRNIP1Q96S55 665 aa11.29□□□□□ -0.6
RFX3-AS1-202ENST00000427722 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 GJA5P36382 358 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RGS3P49796 1198 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 GSTO1P78417 241 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 PICALMQ13492 652 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 MIGA2Q7L4E1 593 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 HOOK2Q96ED9 719 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 CSADQ9Y600 493 aa11.28□□□□□ -0.6
RFX3-AS1-202ENST00000427722 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZBTB48P10074 688 aaPredicted RBP11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZAP70P43403 619 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 RRP1P56182 461 aaKnown RBP11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 OPTNQ96CV9 577 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ECM29Q5VYK3 1845 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ENTPD3O75355 529 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 WDHD1O75717 1129 aaPredicted RBP11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 CYP2E1P05181 493 aaPredicted RBP11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 LDHCP07864 332 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 RHBDL3P58872 404 aa11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 ZSCAN29Q8IWY8 852 aaPredicted RBP11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
RFX3-AS1-202ENST00000427722 NOL10Q9BSC4 688 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms