RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CCDC40Q4G0X9 1142 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CC2D2BQ6DHV5 1058 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CRELD2Q6UXH1 353 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 FAM43BQ6ZT52 329 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 NBPF15Q8N660 670 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 TEX9Q8N6V9 391 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 DRAXINQ8NBI3 349 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 BCAS4Q8TDM0 211 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC12Q8WUD4 166 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZKSCAN4Q969J2 545 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC51Q96ER9 411 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 VCPKMTQ9H867 229 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 STAP2Q9UGK3 403 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 SWAP70Q9UH65 585 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 ITGB1BP2Q9UKP3 347 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 TTF2Q9UNY4 1162 aaKnown RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 IQSEC3Q9UPP2 1182 aaPredicted RBP6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 PPP2R2CQ9Y2T4 447 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 CAPN7Q9Y6W3 813 aa6.37□□□□□ -1.39
VTI1BP4-201ENST00000427516 ITSN1Q15811 1721 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 PRG4Q92954 1404 aaPredicted RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 ERICH2A1L162 156 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 NUTM2FA1L443 756 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 GOLGA6BA6NDN3 693 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 H3BQV1 296 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 EXOC5O00471 708 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 IRF6O14896 467 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 BUB1BO60566 1050 aaPredicted RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 CUTAO60888 179 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 RAB11FIP3O75154 756 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 SCP2P22307 547 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCT5P48643 541 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 APLP1P51693 650 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZRSR2Q15696 482 aaKnown RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 CAMK4Q16566 473 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 FOXD4L6Q3SYB3 417 aaPredicted RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 NAIF1Q69YI7 327 aaPredicted RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 CEP85Q6P2H3 762 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 OLFM4Q6UX06 510 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 FOXD4L3Q6VB84 417 aaPredicted RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC121Q6ZUS5 278 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 TTC6Q86TZ1 520 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZNF483Q8TF39 744 aaPredicted RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 RMDN2Q96LZ7 410 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 TTC14Q96N46 770 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZCCHC17Q9NP64 241 aaKnown RBP6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 HMG20BQ9P0W2 317 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
VTI1BP4-201ENST00000427516 LMTK2Q8IWU2 1503 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 ARHGEF40Q8TER5 1519 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 KDM6AO15550 1401 aaPredicted RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 CDHR2Q9BYE9 1310 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 A0A1W2PQ27 194 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 A0A1W2PQ64 194 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 A0A1W2PQD8 194 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 TESPA1A2RU30 521 aaPredicted RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 DIAPH1O60610 1272 aaKnown RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SERPINC1P01008 464 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 FESP07332 822 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 MYBL2P10244 700 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 EPB41P11171 864 aaKnown RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 FERP16591 822 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 AK2P54819 239 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SEPT2Q15019 361 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SLC5A9Q2M3M2 681 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 TWISTNBQ3B726 338 aaPredicted RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZC3H12AQ5D1E8 599 aaKnown RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SH2D4BQ5SQS7 431 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 ALS2CLQ60I27 953 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 ISM2Q6H9L7 571 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 CAPRIN2Q6IMN6 1127 aaKnown RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 NAA16Q6N069 864 aaPredicted RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 TRIM65Q6PJ69 517 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SLC30A9Q6PML9 568 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 ARHGEF25Q86VW2 580 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SIRT2Q8IXJ6 389 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 PARP9Q8IXQ6 854 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 RBM12BQ8IXT5 1001 aaKnown RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 AOPEPQ8N6M6 819 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 COG1Q8WTW3 980 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 NUP133Q8WUM0 1156 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 PLEKHF1Q96S99 279 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 MTRQ99707 1265 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 SDF4Q9BRK5 362 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 LLPHQ9BRT6 129 aaKnown RBP6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 TBC1D2BQ9UPU7 963 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 ADGRG1Q9Y653 693 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 TET3O43151 1660 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 QRICH2Q9H0J4 1663 aa6.35□□□□□ -1.39
VTI1BP4-201ENST00000427516 CD109Q6YHK3 1445 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 KIAA0232Q92628 1395 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 ATP5JP18859 108 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 PIP4K2AP48426 406 aaPredicted RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 IRAK1P51617 712 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 NLRP5P59047 1200 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 SKOR1P84550 965 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 ROR2Q01974 943 aaKnown RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 MYL5Q02045 173 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms