RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 GLIS3Q8NEA6 775 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
SFXN1-202ENST00000421887 FAM105AQ9NUU6 356 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 AP4E1Q9UPM8 1137 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 DAGLAQ9Y4D2 1042 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 LTBP4Q8N2S1 1624 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
SFXN1-202ENST00000421887 ZNF865P0CJ78 1059 aaPredicted RBP8.28□□□□□ -1.08
SFXN1-202ENST00000421887 EDN3P14138 238 aa8.28□□□□□ -1.08
SFXN1-202ENST00000421887 MAOBP27338 520 aa8.28□□□□□ -1.08
SFXN1-202ENST00000421887 ASPAP45381 313 aa8.28□□□□□ -1.08
SFXN1-202ENST00000421887 ELOAQ14241 798 aaKnown RBP8.28□□□□□ -1.08
SFXN1-202ENST00000421887 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
SFXN1-202ENST00000421887 KRTAP9-7A8MTY7 169 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 DYNC1LI2O43237 492 aaPredicted RBP8.27□□□□□ -1.09
SFXN1-202ENST00000421887 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
SFXN1-202ENST00000421887 CD8BP10966 210 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 OGFOD3Q6PK18 319 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 ACSS3Q9H6R3 686 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
SFXN1-202ENST00000421887 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
SFXN1-202ENST00000421887 HECW1Q76N89 1606 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 RAPGEF6Q8TEU7 1601 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 PLEKHD1A6NEE1 506 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 METTL12A8MUP2 240 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 PHACTR2O75167 634 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 PDGFAP04085 211 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 PI4K2BQ8TCG2 481 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 MISP3Q96FF7 219 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 BHLHE41Q9C0J9 482 aaPredicted RBP8.26□□□□□ -1.09
SFXN1-202ENST00000421887 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 ATP10AO60312 1499 aa8.26□□□□□ -1.09
SFXN1-202ENST00000421887 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
SFXN1-202ENST00000421887 CTSBP07858 339 aa8.25□□□□□ -1.09
SFXN1-202ENST00000421887 FUT4P22083 530 aa8.25□□□□□ -1.09
SFXN1-202ENST00000421887 CYP27C1Q4G0S4 372 aa8.25□□□□□ -1.09
SFXN1-202ENST00000421887 PLD6Q8N2A8 252 aaKnown RBP8.25□□□□□ -1.09
SFXN1-202ENST00000421887 NRSN2Q9GZP1 204 aa8.25□□□□□ -1.09
SFXN1-202ENST00000421887 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
SFXN1-202ENST00000421887 ADAMTS6Q9UKP5 1117 aa8.25□□□□□ -1.09
SFXN1-202ENST00000421887 C9orf84Q5VXU9 1444 aa8.25□□□□□ -1.09
SFXN1-202ENST00000421887 CYP11A1P05108 521 aa8.24□□□□□ -1.09
SFXN1-202ENST00000421887 CD96P40200 585 aa8.24□□□□□ -1.09
SFXN1-202ENST00000421887 POU4F3Q15319 338 aa8.24□□□□□ -1.09
SFXN1-202ENST00000421887 FAM84AQ96KN4 292 aa8.24□□□□□ -1.09
SFXN1-202ENST00000421887 LATS2Q9NRM7 1088 aa8.24□□□□□ -1.09
SFXN1-202ENST00000421887 ZNF777Q9ULD5 760 aaPredicted RBP8.24□□□□□ -1.09
SFXN1-202ENST00000421887 LRRC10BA6NIK2 292 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
SFXN1-202ENST00000421887 HP1BP3Q5SSJ5 553 aaPredicted RBP8.23□□□□□ -1.09
SFXN1-202ENST00000421887 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 FAM181AQ8N9Y4 354 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 LRRN4CLQ8ND94 238 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 NETO1Q8TDF5 533 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 C3P01024 1663 aa8.23□□□□□ -1.09
SFXN1-202ENST00000421887 SUPT6HQ7KZ85 1726 aaKnown RBP8.23□□□□□ -1.09
SFXN1-202ENST00000421887 SCAPERQ9BY12 1400 aa8.22□□□□□ -1.09
SFXN1-202ENST00000421887 MZF1P28698 734 aaPredicted RBP8.22□□□□□ -1.09
SFXN1-202ENST00000421887 NCOA1Q15788 1441 aa8.21□□□□□ -1.09
SFXN1-202ENST00000421887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.21□□□□□ -1.1
SFXN1-202ENST00000421887 TOM1O60784 492 aa8.21□□□□□ -1.1
SFXN1-202ENST00000421887 TNFRSF21O75509 655 aa8.21□□□□□ -1.1
SFXN1-202ENST00000421887 HSPA1LP34931 641 aa8.21□□□□□ -1.1
SFXN1-202ENST00000421887 PCDH1Q08174 1060 aa8.21□□□□□ -1.1
SFXN1-202ENST00000421887 MESP2Q0VG99 397 aa8.21□□□□□ -1.1
SFXN1-202ENST00000421887 PEAR1Q5VY43 1037 aaPredicted RBP8.21□□□□□ -1.1
SFXN1-202ENST00000421887 FOXD3Q9UJU5 478 aaPredicted RBP8.21□□□□□ -1.1
SFXN1-202ENST00000421887 ZNF335Q9H4Z2 1342 aaPredicted RBP8.21□□□□□ -1.1
SFXN1-202ENST00000421887 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.1
SFXN1-202ENST00000421887 TRAPPC8Q9Y2L5 1435 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 ECEL1O95672 775 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 FAM87AP0C7U9 286 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 ZNF423Q2M1K9 1284 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 CLP1Q92989 425 aaKnown RBP8.2□□□□□ -1.1
SFXN1-202ENST00000421887 CORO1BQ9BR76 489 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
SFXN1-202ENST00000421887 CDK5R2Q13319 367 aa8.19□□□□□ -1.1
SFXN1-202ENST00000421887 LILRA6Q6PI73 481 aa8.19□□□□□ -1.1
SFXN1-202ENST00000421887 SNX29Q8TEQ0 813 aa8.19□□□□□ -1.1
SFXN1-202ENST00000421887 TOX2Q96NM4 488 aa8.19□□□□□ -1.1
SFXN1-202ENST00000421887 CLEC4MQ9H2X3 399 aaPredicted RBP8.19□□□□□ -1.1
SFXN1-202ENST00000421887 VAV3Q9UKW4 847 aa8.19□□□□□ -1.1
SFXN1-202ENST00000421887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.18□□□□□ -1.1
SFXN1-202ENST00000421887 A0A096LPE4 126 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 A0A1W2PPZ6 126 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 RAP1GAPP47736 663 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 EIF1AXP47813 144 aaKnown RBP8.18□□□□□ -1.1
SFXN1-202ENST00000421887 PRKCQQ04759 706 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 AAMPQ13685 434 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 MLANAQ16655 118 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 AOC3Q16853 763 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 HELQQ8TDG4 1101 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 AMOTL2Q9Y2J4 779 aa8.18□□□□□ -1.1
SFXN1-202ENST00000421887 NUP153P49790 1475 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms