RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PIBF1Q8WXW3 757 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SNCA-206ENST00000420646 RCOR1Q9UKL0 485 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
SNCA-206ENST00000420646 PCDHA7Q9UN72 937 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 ZMYM6O95789 1325 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 GYS1P13807 737 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 TYRO3Q06418 890 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 PROM2Q8N271 834 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
SNCA-206ENST00000420646 PNPLA7Q6ZV29 1317 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 BAZ2BQ9UIF8 2168 aaKnown RBP10.25□□□□□ -0.77
SNCA-206ENST00000420646 ADCY5O95622 1261 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 ANO6Q4KMQ2 910 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 KRT40Q6A162 431 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 KIF3AQ9Y496 699 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 IARSP41252 1262 aaKnown RBP10.25□□□□□ -0.77
SNCA-206ENST00000420646 KIF23Q02241 960 aaPredicted RBP10.25□□□□□ -0.77
SNCA-206ENST00000420646 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
SNCA-206ENST00000420646 WTAPQ15007 396 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 CTR9Q6PD62 1173 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 FSIP1Q8NA03 581 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 STAG1Q8WVM7 1258 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
SNCA-206ENST00000420646 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
SNCA-206ENST00000420646 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
SNCA-206ENST00000420646 MYSM1Q5VVJ2 828 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 SPC24Q8NBT2 197 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 MTMR7Q9Y216 660 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 CICQ96RK0 1608 aaPredicted RBP10.24□□□□□ -0.77
SNCA-206ENST00000420646 TNKSO95271 1327 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
SNCA-206ENST00000420646 SERPINB2P05120 415 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 PTMAP06454 111 aaKnown RBP10.24□□□□□ -0.77
SNCA-206ENST00000420646 CCDC192P0DO97 292 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
SNCA-206ENST00000420646 GNAT2P19087 354 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 NDUFA8P51970 172 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 STK38Q15208 465 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 SGMS1Q86VZ5 419 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 UBAC1Q9BSL1 405 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 BTBD18B2RXH4 712 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 USP17L8P0C7I0 530 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
SNCA-206ENST00000420646 GPSM2P81274 684 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 SPECC1Q5M775 1068 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 LINC00301Q8NCQ3 95 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 KRT23Q9C075 422 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 CLSTN2Q9H4D0 955 aa10.24□□□□□ -0.77
SNCA-206ENST00000420646 BAZ2AQ9UIF9 1905 aaKnown RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 LETM1O95202 739 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 DDR1Q08345 913 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 GNL2Q13823 731 aaKnown RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 ISM2Q6H9L7 571 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 C17orf53Q8N3J3 647 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 ENAHQ8N8S7 591 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 DCP1AQ9NPI6 582 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 CLCN1P35523 988 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 LIFRP42702 1097 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 NR5A1Q13285 461 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 GRAPQ13588 217 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 ZSCAN30Q86W11 494 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 DZIP1Q86YF9 867 aaKnown RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 ZNF654Q8IZM8 581 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 GRAPLQ8TC17 118 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 RPGRQ92834 1020 aaKnown RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 DYNLL2Q96FJ2 89 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 ZNF396Q96N95 335 aaPredicted RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 CLIC6Q96NY7 704 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 CNNM2Q9H8M5 875 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 TNRC6CQ9HCJ0 1690 aaKnown RBP10.23□□□□□ -0.77
SNCA-206ENST00000420646 ARAP2Q8WZ64 1704 aa10.23□□□□□ -0.77
SNCA-206ENST00000420646 ERICH2A1L162 156 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 RTN1Q16799 776 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 SYNE3Q6ZMZ3 975 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 SHISA4Q96DD7 197 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 MCM9Q9NXL9 1143 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 UFL1O94874 794 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 PLEKHA8P1O95397 391 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 VEGFAP15692 232 aaPredicted RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 FANCBQ8NB91 859 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 CBX8Q9HC52 389 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 DDX19AQ9NUU7 478 aaKnown RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 WDR19Q8NEZ3 1342 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 LAMB2P55268 1798 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 PSDA5PKW4 1024 aaPredicted RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 BIN1O00499 593 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 SPTLC2O15270 562 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms