RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 CXCL11O14625 94 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 TRIM27P14373 513 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 RGS3P49796 1198 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 TIMM10P62072 90 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 KIF22Q14807 665 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 CPA4Q9UI42 421 aa13.23□□□□□ -0.29
HDLBP-207ENST00000420451 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 A0A1B0GUL7 405 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 BCRP11274 1271 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
HDLBP-207ENST00000420451 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
HDLBP-207ENST00000420451 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 SIPA1L1O43166 1804 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-207ENST00000420451 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-207ENST00000420451 GNAI3P08754 354 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 RLBP1P12271 317 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 OSBPP22059 807 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 PSMC4P43686 418 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 RHBDL3P58872 404 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
HDLBP-207ENST00000420451 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-207ENST00000420451 XAGE2Q96GT9 111 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 MAST2Q6P0Q8 1798 aa13.21□□□□□ -0.29
HDLBP-207ENST00000420451 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
HDLBP-207ENST00000420451 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 GPR75-ASB3A0A0A6YYF3 556 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
HDLBP-207ENST00000420451 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
HDLBP-207ENST00000420451 PTPRAP18433 802 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 TFCP2Q12800 502 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 SLC4A8Q2Y0W8 1093 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 ABCF2Q9UG63 623 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 AKAP2Q9Y2D5 859 aa13.2□□□□□ -0.3
HDLBP-207ENST00000420451 TBC1D12O60347 775 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 CYP2C8P10632 490 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 BTDP43251 543 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 MECOMQ03112 1051 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
HDLBP-207ENST00000420451 MTFR1Q15390 333 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
HDLBP-207ENST00000420451 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
HDLBP-207ENST00000420451 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
HDLBP-207ENST00000420451 MYO5AQ9Y4I1 1855 aaKnown RBP13.19□□□□□ -0.3
HDLBP-207ENST00000420451 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
HDLBP-207ENST00000420451 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
HDLBP-207ENST00000420451 HOXD10P28358 340 aa13.18□□□□□ -0.3
HDLBP-207ENST00000420451 ARID4AP29374 1257 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-207ENST00000420451 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
HDLBP-207ENST00000420451 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-207ENST00000420451 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
HDLBP-207ENST00000420451 UBE2Q1Q7Z7E8 422 aa13.18□□□□□ -0.3
HDLBP-207ENST00000420451 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
HDLBP-207ENST00000420451 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-207ENST00000420451 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-207ENST00000420451 MAP4K4O95819 1239 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-207ENST00000420451 MYCP01106 439 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-207ENST00000420451 GRK4P32298 578 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 PRKCZQ05513 592 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 PICALMQ13492 652 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 PI16Q6UXB8 463 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 ERICH6Q7L0X2 663 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
HDLBP-207ENST00000420451 GJA8P48165 433 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 FCGRTP55899 365 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 ZSCAN29Q8IWY8 852 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-207ENST00000420451 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 RAET1EQ8TD07 263 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-207ENST00000420451 GABRQQ9UN88 632 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 DOCK3Q8IZD9 2030 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
HDLBP-207ENST00000420451 GNAI2P04899 355 aa13.15□□□□□ -0.3
HDLBP-207ENST00000420451 GJB1P08034 283 aa13.15□□□□□ -0.3
HDLBP-207ENST00000420451 MCAMP43121 646 aa13.15□□□□□ -0.3
HDLBP-207ENST00000420451 FXR1P51114 621 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDLBP-207ENST00000420451 TBC1D9Q6ZT07 1266 aa13.15□□□□□ -0.3
HDLBP-207ENST00000420451 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-207ENST00000420451 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
HDLBP-207ENST00000420451 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
HDLBP-207ENST00000420451 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-207ENST00000420451 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
HDLBP-207ENST00000420451 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms