RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 B3GALT4O96024 378 aa8.43□□□□□ -1.06
VPS45-203ENST00000419023 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
VPS45-203ENST00000419023 ZNF326Q5BKZ1 582 aaKnown RBP8.43□□□□□ -1.06
VPS45-203ENST00000419023 MRPL18Q9H0U6 180 aaKnown RBP8.43□□□□□ -1.06
VPS45-203ENST00000419023 ZFYVE1Q9HBF4 777 aa8.43□□□□□ -1.06
VPS45-203ENST00000419023 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
VPS45-203ENST00000419023 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
VPS45-203ENST00000419023 DUOXA2Q1HG44 320 aa8.42□□□□□ -1.06
VPS45-203ENST00000419023 ACAD11Q709F0 780 aa8.42□□□□□ -1.06
VPS45-203ENST00000419023 TMC4Q7Z404 712 aa8.42□□□□□ -1.06
VPS45-203ENST00000419023 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
VPS45-203ENST00000419023 PLA2R1Q13018 1463 aa8.42□□□□□ -1.06
VPS45-203ENST00000419023 PTPRKQ15262 1439 aa8.41□□□□□ -1.06
VPS45-203ENST00000419023 ALX3O95076 343 aa8.41□□□□□ -1.06
VPS45-203ENST00000419023 ADGRE1Q14246 886 aa8.41□□□□□ -1.06
VPS45-203ENST00000419023 MBTPS1Q14703 1052 aa8.41□□□□□ -1.06
VPS45-203ENST00000419023 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
VPS45-203ENST00000419023 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
VPS45-203ENST00000419023 MED1Q15648 1581 aaPredicted RBP8.4□□□□□ -1.06
VPS45-203ENST00000419023 FBXO24O75426 580 aa8.4□□□□□ -1.06
VPS45-203ENST00000419023 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.06
VPS45-203ENST00000419023 GPAT2Q6NUI2 795 aa8.4□□□□□ -1.06
VPS45-203ENST00000419023 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.06
VPS45-203ENST00000419023 ANKLE2Q86XL3 938 aa8.4□□□□□ -1.06
VPS45-203ENST00000419023 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
VPS45-203ENST00000419023 DDX54Q8TDD1 881 aaKnown RBP8.4□□□□□ -1.06
VPS45-203ENST00000419023 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
VPS45-203ENST00000419023 ABCA6Q8N139 1617 aa8.4□□□□□ -1.07
VPS45-203ENST00000419023 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
VPS45-203ENST00000419023 IREB2P48200 963 aaKnown RBP8.39□□□□□ -1.07
VPS45-203ENST00000419023 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
VPS45-203ENST00000419023 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
VPS45-203ENST00000419023 THEMISQ8N1K5 641 aaPredicted RBP8.39□□□□□ -1.07
VPS45-203ENST00000419023 TMEM130Q8N3G9 435 aa8.39□□□□□ -1.07
VPS45-203ENST00000419023 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
VPS45-203ENST00000419023 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
VPS45-203ENST00000419023 AKTIPQ9H8T0 292 aa8.39□□□□□ -1.07
VPS45-203ENST00000419023 TMEM39AQ9NV64 488 aa8.39□□□□□ -1.07
VPS45-203ENST00000419023 CPS1P31327 1500 aa8.39□□□□□ -1.07
VPS45-203ENST00000419023 SORBS3O60504 671 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 CYP11A1P05108 521 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 NOS3P29474 1203 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 GATA4P43694 442 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 HNRNPMP52272 730 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS45-203ENST00000419023 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 NRSN2Q9GZP1 204 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 VTI1BQ9UEU0 232 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 PPM1HQ9ULR3 514 aa8.38□□□□□ -1.07
VPS45-203ENST00000419023 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
VPS45-203ENST00000419023 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
VPS45-203ENST00000419023 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
VPS45-203ENST00000419023 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
VPS45-203ENST00000419023 ECEL1O95672 775 aa8.37□□□□□ -1.07
VPS45-203ENST00000419023 MAOBP27338 520 aa8.37□□□□□ -1.07
VPS45-203ENST00000419023 POU4F3Q15319 338 aa8.37□□□□□ -1.07
VPS45-203ENST00000419023 RUSC1Q9BVN2 902 aa8.37□□□□□ -1.07
VPS45-203ENST00000419023 CFDP1Q9UEE9 299 aaPredicted RBP8.37□□□□□ -1.07
VPS45-203ENST00000419023 TCOF1Q13428 1488 aaKnown RBP8.37□□□□□ -1.07
VPS45-203ENST00000419023 SUPT6HQ7KZ85 1726 aaKnown RBP8.37□□□□□ -1.07
VPS45-203ENST00000419023 CEP170BQ9Y4F5 1589 aaPredicted RBP8.36□□□□□ -1.07
VPS45-203ENST00000419023 ABCC1P33527 1531 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 RBM47A0AV96 593 aaKnown RBP8.36□□□□□ -1.07
VPS45-203ENST00000419023 DLGAP3O95886 979 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 CTSBP07858 339 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 CTSHP09668 335 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 AP3B2Q13367 1082 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 NECAB3Q96P71 396 aaPredicted RBP8.36□□□□□ -1.07
VPS45-203ENST00000419023 SPOCK3Q9BQ16 436 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 CORO1BQ9BR76 489 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 CEP44Q9C0F1 390 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 SHANK2Q9UPX8 1470 aa8.36□□□□□ -1.07
VPS45-203ENST00000419023 A2ML1A8K2U0 1454 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 A2MP01023 1474 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 ENC1O14682 589 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 MSTNO14793 375 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 PROCP04070 461 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 GLB1P16278 677 aa8.35□□□□□ -1.07
VPS45-203ENST00000419023 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
VPS45-203ENST00000419023 CCDC18Q5T9S5 1454 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 MYO3AQ8NEV4 1616 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 PAGE1O75459 146 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 CELA3AP09093 270 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 SULF2Q8IWU5 870 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 STK35Q8TDR2 534 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 ANKRD24Q8TF21 1146 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 MEGF10Q96KG7 1140 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 RNF208Q9H0X6 261 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 KIDINS220Q9ULH0 1771 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 TNRQ92752 1358 aa8.34□□□□□ -1.07
VPS45-203ENST00000419023 PREX2Q70Z35 1606 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 ITGAEP38570 1179 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 EXOSC6Q5RKV6 272 aaKnown RBP8.33□□□□□ -1.08
VPS45-203ENST00000419023 SAMD9LQ8IVG5 1584 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 CRELD1Q96HD1 420 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 BCL11AQ9H165 835 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 ZNF142P52746 1687 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms