RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 CPA4Q9UI42 421 aa22.69■■□□□ 1.22
COPS8-204ENST00000419015 MGAMO43451 1857 aa22.68■■□□□ 1.22
COPS8-204ENST00000419015 DDTLA6NHG4 134 aaPredicted RBP22.68■■□□□ 1.22
COPS8-204ENST00000419015 CXCL11O14625 94 aa22.68■■□□□ 1.22
COPS8-204ENST00000419015 SLURP2P0DP57 97 aa22.68■■□□□ 1.22
COPS8-204ENST00000419015 PRMT2P55345 433 aa22.68■■□□□ 1.22
COPS8-204ENST00000419015 MVPQ14764 893 aaKnown RBP22.68■■□□□ 1.22
COPS8-204ENST00000419015 SCYL3Q8IZE3 742 aa22.68■■□□□ 1.22
COPS8-204ENST00000419015 SH3TC2Q8TF17 1288 aa22.68■■□□□ 1.22
COPS8-204ENST00000419015 MROH7-TTC4A0A0A0MT08 1334 aa22.67■■□□□ 1.22
COPS8-204ENST00000419015 BTDP43251 543 aa22.67■■□□□ 1.22
COPS8-204ENST00000419015 RHBDL3P58872 404 aa22.67■■□□□ 1.22
COPS8-204ENST00000419015 ATF7IPQ6VMQ6 1270 aa22.67■■□□□ 1.22
COPS8-204ENST00000419015 TRIM47Q96LD4 638 aa22.67■■□□□ 1.22
COPS8-204ENST00000419015 PCDH10Q9P2E7 1040 aa22.67■■□□□ 1.22
COPS8-204ENST00000419015 GPR75-ASB3A0A0A6YYF3 556 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 PNMA6EA0A0J9YXQ4 647 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 BCAR3O75815 825 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 PTPRAP18433 802 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 MECOMQ03112 1051 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 SPTY2D1Q68D10 685 aaPredicted RBP22.66■■□□□ 1.22
COPS8-204ENST00000419015 SLF2Q8IX21 1173 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 HMG20BQ9P0W2 317 aa22.66■■□□□ 1.22
COPS8-204ENST00000419015 A0A0G2JLL6 359 aaPredicted RBP22.65■■□□□ 1.22
COPS8-204ENST00000419015 BCRP11274 1271 aa22.65■■□□□ 1.22
COPS8-204ENST00000419015 PSMC4P43686 418 aa22.65■■□□□ 1.22
COPS8-204ENST00000419015 PI16Q6UXB8 463 aa22.65■■□□□ 1.22
COPS8-204ENST00000419015 PRRT2Q7Z6L0 340 aaPredicted RBP22.65■■□□□ 1.22
COPS8-204ENST00000419015 SRRDQ9UH36 339 aa22.65■■□□□ 1.22
COPS8-204ENST00000419015 AFG3L2Q9Y4W6 797 aa22.65■■□□□ 1.22
COPS8-204ENST00000419015 ZHX2Q9Y6X8 837 aa22.65■■□□□ 1.22
COPS8-204ENST00000419015 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
COPS8-204ENST00000419015 ECM2O94769 699 aaPredicted RBP22.64■■□□□ 1.21
COPS8-204ENST00000419015 GNAI2P04899 355 aa22.64■■□□□ 1.21
COPS8-204ENST00000419015 OSBPP22059 807 aa22.64■■□□□ 1.21
COPS8-204ENST00000419015 ARID4AP29374 1257 aaPredicted RBP22.64■■□□□ 1.21
COPS8-204ENST00000419015 SLC4A8Q2Y0W8 1093 aa22.64■■□□□ 1.21
COPS8-204ENST00000419015 ERICH6Q7L0X2 663 aa22.64■■□□□ 1.21
COPS8-204ENST00000419015 ZSCAN29Q8IWY8 852 aaPredicted RBP22.64■■□□□ 1.21
COPS8-204ENST00000419015 NSUN4Q96CB9 384 aaKnown RBP22.64■■□□□ 1.21
COPS8-204ENST00000419015 NEUROD6Q96NK8 337 aa22.64■■□□□ 1.21
COPS8-204ENST00000419015 PARK7Q99497 189 aaKnown RBP22.64■■□□□ 1.21
COPS8-204ENST00000419015 NPM3O75607 178 aaKnown RBP22.63■■□□□ 1.21
COPS8-204ENST00000419015 MYCP01106 439 aaPredicted RBP22.63■■□□□ 1.21
COPS8-204ENST00000419015 CYP2C8P10632 490 aa22.63■■□□□ 1.21
COPS8-204ENST00000419015 PICALMQ13492 652 aa22.63■■□□□ 1.21
COPS8-204ENST00000419015 SPATA5Q8NB90 893 aa22.63■■□□□ 1.21
COPS8-204ENST00000419015 GCC1Q96CN9 775 aa22.63■■□□□ 1.21
COPS8-204ENST00000419015 CTNND1O60716 968 aaKnown RBP22.62■■□□□ 1.21
COPS8-204ENST00000419015 TBC1D9Q6ZT07 1266 aa22.62■■□□□ 1.21
COPS8-204ENST00000419015 PICK1Q9NRD5 415 aa22.62■■□□□ 1.21
COPS8-204ENST00000419015 TBC1D12O60347 775 aa22.61■■□□□ 1.21
COPS8-204ENST00000419015 MCAMP43121 646 aa22.61■■□□□ 1.21
COPS8-204ENST00000419015 MTFR1Q15390 333 aa22.61■■□□□ 1.21
COPS8-204ENST00000419015 FASTKD5Q7L8L6 764 aaKnown RBP22.61■■□□□ 1.21
COPS8-204ENST00000419015 FRAT1Q92837 279 aaPredicted RBP22.61■■□□□ 1.21
COPS8-204ENST00000419015 CLUAP1Q96AJ1 413 aa22.61■■□□□ 1.21
COPS8-204ENST00000419015 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.61■■□□□ 1.21
COPS8-204ENST00000419015 ATAD5Q96QE3 1844 aa22.61■■□□□ 1.21
COPS8-204ENST00000419015 COL2A1P02458 1487 aaPredicted RBP22.6■■□□□ 1.21
COPS8-204ENST00000419015 SLC45A1Q9Y2W3 748 aa22.6■■□□□ 1.21
COPS8-204ENST00000419015 MYPNQ86TC9 1320 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 DOCK3Q8IZD9 2030 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 FMNL1O95466 1100 aaPredicted RBP22.59■■□□□ 1.21
COPS8-204ENST00000419015 MAP4K4O95819 1239 aaPredicted RBP22.59■■□□□ 1.21
COPS8-204ENST00000419015 HOXD10P28358 340 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 TMEM57Q8N5G2 664 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 SHISA4Q96DD7 197 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 CDK5RAP2Q96SN8 1893 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 MYO5AQ9Y4I1 1855 aaKnown RBP22.59■■□□□ 1.21
COPS8-204ENST00000419015 SIPA1L1O43166 1804 aa22.59■■□□□ 1.21
COPS8-204ENST00000419015 GRK4P32298 578 aa22.58■■□□□ 1.21
COPS8-204ENST00000419015 G3BP1Q13283 466 aaKnown RBP eCLIP22.58■■□□□ 1.21
COPS8-204ENST00000419015 HABP4Q5JVS0 413 aaKnown RBP22.58■■□□□ 1.21
COPS8-204ENST00000419015 CCDC84Q86UT8 332 aaPredicted RBP22.58■■□□□ 1.21
COPS8-204ENST00000419015 LOC285556D6RIA3 1793 aa22.58■■□□□ 1.2
COPS8-204ENST00000419015 MAST2Q6P0Q8 1798 aa22.58■■□□□ 1.2
COPS8-204ENST00000419015 LDHCP07864 332 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 GSTO1P78417 241 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 PRKCZQ05513 592 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 POLA2Q14181 598 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 GORABQ5T7V8 394 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 GADL1Q6ZQY3 521 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 RAET1EQ8TD07 263 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 OSBPL5Q9H0X9 879 aaPredicted RBP22.57■■□□□ 1.2
COPS8-204ENST00000419015 FOCADQ5VW36 1801 aa22.57■■□□□ 1.2
COPS8-204ENST00000419015 CEP290O15078 2479 aa22.56■■□□□ 1.2
COPS8-204ENST00000419015 TRIM75PA6NK02 468 aa22.56■■□□□ 1.2
COPS8-204ENST00000419015 FAM196BA6NMK8 535 aa22.56■■□□□ 1.2
COPS8-204ENST00000419015 FCGRTP55899 365 aa22.56■■□□□ 1.2
COPS8-204ENST00000419015 GPR108Q9NPR9 543 aa22.56■■□□□ 1.2
COPS8-204ENST00000419015 RAI14Q9P0K7 980 aa22.56■■□□□ 1.2
COPS8-204ENST00000419015 SZT2Q5T011 3432 aa22.55■■□□□ 1.2
COPS8-204ENST00000419015 UQCRFS1P1P0C7P4 283 aa22.55■■□□□ 1.2
COPS8-204ENST00000419015 RRP1BQ14684 758 aaKnown RBP22.55■■□□□ 1.2
COPS8-204ENST00000419015 ZKSCAN2Q63HK3 967 aa22.55■■□□□ 1.2
COPS8-204ENST00000419015 SSH3Q8TE77 659 aa22.55■■□□□ 1.2
COPS8-204ENST00000419015 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.55■■□□□ 1.2
COPS8-204ENST00000419015 GABRQQ9UN88 632 aa22.55■■□□□ 1.2
COPS8-204ENST00000419015 AGTPBP1Q9UPW5 1226 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms