RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MYCP01106 439 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 SERPINB4P48594 390 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 ERVK-9P63128 1117 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 HDGFL2Q7Z4V5 671 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 MAFAQ8NHW3 353 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 COG3Q96JB2 828 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 CXXC1Q9P0U4 656 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 SCN7AQ01118 1682 aa7.38□□□□□ -1.23
ECHDC1-206ENST00000417628 KIAA0100Q14667 2235 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 CD2BP2O95400 341 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 BMP8BP34820 402 aa7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 ARID5BQ14865 1188 aa7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 TMPRSS4Q9NRS4 437 aa7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 RBM19Q9Y4C8 960 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-206ENST00000417628 SOWAHDA6NJG2 315 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 TMEM229AB2RXF0 380 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 M0R2N6 131 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 STAU1O95793 577 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 ALDH1A1P00352 501 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 FBLN1P23142 703 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 FSHRP23945 695 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 WEE1P30291 646 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 FKBP1BP68106 108 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 RRS1Q15050 365 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 CC2D2BQ6DHV5 1058 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 CD99L2Q8TCZ2 262 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 ZNF428Q96B54 188 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 DCPSQ96C86 337 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 SHISA4Q96DD7 197 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 HINFPQ9BQA5 517 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 BCL2L13Q9BXK5 485 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 ZNF358Q9NW07 568 aa7.36□□□□□ -1.23
ECHDC1-206ENST00000417628 VCANP13611 3396 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 CABP4P57796 275 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 GLIPR1L2Q4G1C9 344 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 FAM109BQ6ICB4 259 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 DNAJC10Q8IXB1 793 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 PURBQ96QR8 312 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 C1QTNF1Q9BXJ1 281 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 CYLDQ9NQC7 956 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 ZBTB1Q9Y2K1 713 aa7.35□□□□□ -1.23
ECHDC1-206ENST00000417628 FLT4P35916 1363 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 H7C1D1 291 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 PPIP5K2O43314 1243 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 LILRA1O75019 489 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 HSP90AB1P08238 724 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 CYP19A1P11511 503 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 CXCL9Q07325 125 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 UBE2Q1Q7Z7E8 422 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 TDHQ8IZJ6 230 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 GAS2L2Q8NHY3 880 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 CDCA5Q96FF9 252 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 GDF15Q99988 308 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 PTCH2Q9Y6C5 1203 aa7.34□□□□□ -1.23
ECHDC1-206ENST00000417628 A0A087WZG4 1122 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 WNT7AO00755 349 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 ALDH1B1P30837 517 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 CAPN12Q6ZSI9 719 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 FAM161BQ96MY7 647 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 CNOT7Q9UIV1 285 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 ZNRF3Q9ULT6 936 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 BRCA2P51587 3418 aa7.33□□□□□ -1.24
ECHDC1-206ENST00000417628 SHTN1A0MZ66 631 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 KLRG2A4D1S0 409 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 ADH1CP00326 375 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 NR3C2P08235 984 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 MRE11P49959 708 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 GDF10P55107 478 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 DHX9Q08211 1270 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 FKBP5Q13451 457 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 TNIP1Q15025 636 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 PPP1R26Q5T8A7 1209 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 TMC1Q8TDI8 760 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 MRGPRX2Q96LB1 330 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 TERF2IPQ9NYB0 399 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 SEPT3Q9UH03 358 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 KDM3BQ7LBC6 1761 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 KIF24Q5T7B8 1368 aa7.32□□□□□ -1.24
ECHDC1-206ENST00000417628 LAMA3Q16787 3333 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 SLC19A1P41440 591 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 EPHA4P54764 986 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 NR5A1Q13285 461 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 AOC3Q16853 763 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 ZNF697Q5TEC3 545 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 DNAJC14Q6Y2X3 702 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 CCDC116Q8IYX3 515 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 ETNK1Q9HBU6 452 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 GGA3Q9NZ52 723 aa7.31□□□□□ -1.24
ECHDC1-206ENST00000417628 FARP2O94887 1054 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 INHAP05111 366 aa7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 FOXK2Q01167 660 aa7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 ARHGEF6Q15052 776 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms