RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 PEAK1Q9H792 1746 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 EZRP15311 586 aaKnown RBP8.9□□□□□ -0.98
SIK3-203ENST00000415541 DDR1Q08345 913 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 IQCB1Q15051 598 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 EPHA10Q5JZY3 1008 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 B4GALNT4Q76KP1 1039 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 SPATS2Q86XZ4 545 aaKnown RBP8.9□□□□□ -0.98
SIK3-203ENST00000415541 SETDB2Q96T68 719 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 CCNL1Q9UK58 526 aaPredicted RBP8.9□□□□□ -0.98
SIK3-203ENST00000415541 FAM169AQ9Y6X4 670 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 RGPD1P0DJD0 1748 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 CLNS1AP54105 237 aaKnown RBP8.9□□□□□ -0.98
SIK3-203ENST00000415541 HAND2P61296 217 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 TUBB2AQ13885 445 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 CCDC83Q8IWF9 413 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 TUBB2BQ9BVA1 445 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 FAM204AQ9H8W3 233 aa8.9□□□□□ -0.98
SIK3-203ENST00000415541 EYA2O00167 538 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 KCNQ2O43526 872 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 KINO60870 393 aaKnown RBP8.9□□□□□ -0.99
SIK3-203ENST00000415541 CPA1P15085 419 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 ITGA6P23229 1130 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 RWDD2BP57060 319 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 NMIQ13287 307 aaPredicted RBP8.9□□□□□ -0.99
SIK3-203ENST00000415541 CCDC50Q8IVM0 306 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 OTUD6BQ8N6M0 293 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 PPP1R1BQ9UD71 204 aaPredicted RBP8.9□□□□□ -0.99
SIK3-203ENST00000415541 MYO6Q9UM54 1294 aa8.9□□□□□ -0.99
SIK3-203ENST00000415541 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 AK2P54819 239 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 NBPF14Q5TI25 921 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 VPS53Q5VIR6 699 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 FBXW10Q5XX13 1052 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 IL17RAQ96F46 866 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 ETAA1Q9NY74 926 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 RTCBQ9Y3I0 505 aaKnown RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 CAPN7Q9Y6W3 813 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 CBFA2T2O43439 604 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 MCM3P25205 808 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 HSPA4P34932 840 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 ARHGAP25P42331 645 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 TRAF1Q13077 416 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 LRRC24Q50LG9 513 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 TTC19Q6DKK2 380 aaPredicted RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 RSRC2Q7L4I2 434 aaKnown RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 FAM177A1Q8N128 213 aaPredicted RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 FAM227BQ96M60 508 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 ANKIB1Q9P2G1 1089 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 ZNF219Q9P2Y4 722 aaPredicted RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 CFAP45Q9UL16 551 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 A6NNZ2 444 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 PHACTR2O75167 634 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 CHMP4BP1P59074 171 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 MAP3K9P80192 1104 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 ADCY2Q08462 1091 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 TUBB8Q3ZCM7 444 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 CCDC152Q4G0S7 254 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 SMIM5Q71RC9 77 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 IQCA1Q86XH1 822 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 PUS3Q9BZE2 481 aaKnown RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
SIK3-203ENST00000415541 PARP3Q9Y6F1 533 aa8.89□□□□□ -0.99
SIK3-203ENST00000415541 SH3TC1Q8TE82 1336 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 NEFHP12036 1026 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 SLC5A1P13866 664 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 GCKP35557 465 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 LRRC2Q9BYS8 371 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 MCM8Q9UJA3 840 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 RBM8AQ9Y5S9 174 aaKnown RBP8.88□□□□□ -0.99
SIK3-203ENST00000415541 TOPAZ1Q8N9V7 1692 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 CEMIPQ8WUJ3 1361 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 TAF5LO75529 589 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 CRKLP46109 303 aaKnown RBP8.88□□□□□ -0.99
SIK3-203ENST00000415541 CCDC129Q6ZRS4 1044 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 CDC5LQ99459 802 aaKnown RBP8.88□□□□□ -0.99
SIK3-203ENST00000415541 ADCY9O60503 1353 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 NALCNQ8IZF0 1738 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 RAD21O60216 631 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 CCT5P48643 541 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 HLFQ16534 295 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 PREPLQ4J6C6 727 aaPredicted RBP8.88□□□□□ -0.99
SIK3-203ENST00000415541 AOPEPQ8N6M6 819 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 EPC1Q9H2F5 836 aa8.88□□□□□ -0.99
SIK3-203ENST00000415541 PAX7P23759 505 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 FERMT3Q86UX7 667 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 PRPF38AQ8NAV1 312 aaKnown RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 LEO1Q8WVC0 666 aaPredicted RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 NLRP3Q96P20 1036 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 MRFAP1Q9Y605 127 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms