RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 CIB2O75838 187 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 BMP15O95972 392 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 APBA3O96018 575 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 MUM1L1Q5H9M0 696 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 SDCCAG8Q86SQ7 713 aaPredicted RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 KCNG4Q8TDN1 519 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 DACT3Q96B18 629 aaPredicted RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 UBE2HP62256 183 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 DPP8Q6V1X1 898 aaPredicted RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 ZBED4O75132 1171 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 AOPEPQ8N6M6 819 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CPLX4Q7Z7G2 160 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 GCNT3O95395 438 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 AATFQ9NY61 560 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 MTRF1LQ9UGC7 380 aaKnown RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CNPY2Q9Y2B0 182 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 ANKRD36BQ8N2N9 1353 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 ARHGEF35A5YM69 484 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 GKAP1Q5VSY0 366 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 STMN2Q93045 179 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 NUF2Q9BZD4 464 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CTAGE15A4D2H0 777 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 ESPNB1AK53 854 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CTAGE8P0CG41 777 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CTAGE6Q86UF2 777 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CTAGE4Q8IX94 777 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 TFCP2Q12800 502 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CEP120Q8N960 986 aa12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-202ENST00000410080 HGSO14964 777 aaPredicted RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 FAM98CQ17RN3 349 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 ARHGEF16Q5VV41 709 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 OLA1Q9NTK5 396 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 GGA1Q9UJY5 639 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 FNDC3AQ9Y2H6 1198 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 NEMFO60524 1076 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 SDSP20132 328 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 NSD2O96028 1365 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 TRAF5O00463 557 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 Q3C1V9 767 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 BANK1Q8NDB2 785 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 KRT86O43790 486 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 DCUN1D2Q6PH85 259 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 LRRC43Q8N309 656 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 LZTFL1Q9NQ48 299 aa12.53□□□□□ -0.4
PRPF40A-202ENST00000410080 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 CAPN9O14815 690 aa12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 SYT1P21579 422 aa12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 ZNF174Q15697 407 aa12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 STIM2Q9P246 746 aa12.52□□□□□ -0.4
PRPF40A-202ENST00000410080 KIF3CO14782 793 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 SLC12A2P55011 1212 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 MMS19Q96T76 1030 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 MRPL44Q9H9J2 332 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 ASXL2Q76L83 1435 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 GBP7Q8N8V2 638 aaPredicted RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 ABT1Q9ULW3 272 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 NPATQ14207 1427 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 OPA1O60313 960 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 VIMP08670 466 aaKnown RBP12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 ZBTB33Q86T24 672 aa12.52□□□□□ -0.41
PRPF40A-202ENST00000410080 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms