RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 BRI3BPQ8WY22 251 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 DPF3Q92784 378 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 ZDHHC16Q969W1 377 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 ZNF594Q96JF6 807 aaPredicted RBP9.73□□□□□ -0.85
LSM5-202ENST00000409292 WRNIP1Q96S55 665 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 PTPN18Q99952 460 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 ZNF341Q9BYN7 854 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 SUGT1Q9Y2Z0 365 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 PTCH2Q9Y6C5 1203 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 VAMP4O75379 141 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 IFIT1P09914 478 aaKnown RBP9.72□□□□□ -0.85
LSM5-202ENST00000409292 GJA5P36382 358 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 UBXN2AP68543 259 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 LACTBP83111 547 aaPredicted RBP9.72□□□□□ -0.85
LSM5-202ENST00000409292 METTL24Q5JXM2 366 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 FKBP1CQ5VVH2 108 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.72□□□□□ -0.85
LSM5-202ENST00000409292 FAM83AQ86UY5 434 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.72□□□□□ -0.852e-7■□□□□ 9.7
LSM5-202ENST00000409292 RAET1EQ8TD07 263 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 MRIQ9BWK5 157 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 BIN2Q9UBW5 565 aaPredicted RBP9.72□□□□□ -0.85
LSM5-202ENST00000409292 PCDHAC2Q9Y5I4 1007 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 NR2E3Q9Y5X4 410 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 FANCIQ9NVI1 1328 aa9.72□□□□□ -0.85
LSM5-202ENST00000409292 F6X3S4 739 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 HRO43593 1189 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 FMNL1O95466 1100 aaPredicted RBP9.71□□□□□ -0.86
LSM5-202ENST00000409292 MYCP01106 439 aaPredicted RBP9.71□□□□□ -0.86
LSM5-202ENST00000409292 CAPN2P17655 700 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 PPATQ06203 517 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 EXOSC9Q06265 439 aaKnown RBP9.71□□□□□ -0.86
LSM5-202ENST00000409292 PPIL2Q13356 520 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 FAM43AQ8N2R8 423 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
LSM5-202ENST00000409292 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 IRS2Q9Y4H2 1338 aa9.71□□□□□ -0.86
LSM5-202ENST00000409292 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
LSM5-202ENST00000409292 FXR1P51114 621 aaKnown RBP eCLIP9.7□□□□□ -0.86
LSM5-202ENST00000409292 WDR66Q8TBY9 1149 aa9.7□□□□□ -0.86
LSM5-202ENST00000409292 SH3TC2Q8TF17 1288 aa9.7□□□□□ -0.86
LSM5-202ENST00000409292 ZDHHC15Q96MV8 337 aa9.7□□□□□ -0.86
LSM5-202ENST00000409292 TEPSINQ96N21 525 aa9.7□□□□□ -0.86
LSM5-202ENST00000409292 MRS2Q9HD23 443 aa9.7□□□□□ -0.86
LSM5-202ENST00000409292 GNL3LQ9NVN8 582 aaKnown RBP9.7□□□□□ -0.86
LSM5-202ENST00000409292 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
LSM5-202ENST00000409292 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
LSM5-202ENST00000409292 BTBD19C9JJ37 291 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 IRF6O14896 467 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 TNRC18O15417 2968 aaPredicted RBP9.69□□□□□ -0.86
LSM5-202ENST00000409292 GRK4P32298 578 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 PSMC4P43686 418 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 FCGRTP55899 365 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 HHIPL2Q6UWX4 724 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 FBXO33Q7Z6M2 555 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 ANKRD23Q86SG2 305 aa9.69□□□□□ -0.86
LSM5-202ENST00000409292 PARK7Q99497 189 aaKnown RBP9.69□□□□□ -0.86
LSM5-202ENST00000409292 IQSEC3Q9UPP2 1182 aaPredicted RBP9.69□□□□□ -0.86
LSM5-202ENST00000409292 LAMB1P07942 1786 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 H0YGN5 161 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 PDHXO00330 501 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 PDE8BO95263 885 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 SLC5A1P13866 664 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 PUM3Q15397 648 aaKnown RBP9.68□□□□□ -0.86
LSM5-202ENST00000409292 EPHA10Q5JZY3 1008 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 FAM151AQ8WW52 585 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 ZKSCAN4Q969J2 545 aaPredicted RBP9.68□□□□□ -0.86
LSM5-202ENST00000409292 PICK1Q9NRD5 415 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 SRRDQ9UH36 339 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 HDAC5Q9UQL6 1122 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 VPS9D1Q9Y2B5 631 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 SNCAIPQ9Y6H5 919 aa9.68□□□□□ -0.86
LSM5-202ENST00000409292 RPAP1Q9BWH6 1393 aaPredicted RBP9.67□□□□□ -0.86
LSM5-202ENST00000409292 MYPNQ86TC9 1320 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 ANP32CO43423 234 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 GJB1P08034 283 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 CACNB3P54284 484 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 FASTKD5Q7L8L6 764 aaKnown RBP9.67□□□□□ -0.86
LSM5-202ENST00000409292 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.67□□□□□ -0.86
LSM5-202ENST00000409292 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 PUS3Q9BZE2 481 aaKnown RBP9.67□□□□□ -0.86
LSM5-202ENST00000409292 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 CPA4Q9UI42 421 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 RIPOR2Q9Y4F9 1068 aa9.67□□□□□ -0.86
LSM5-202ENST00000409292 AOX1Q06278 1338 aa9.66□□□□□ -0.86
LSM5-202ENST00000409292 CXCL11O14625 94 aa9.66□□□□□ -0.86
LSM5-202ENST00000409292 C17orf99Q6UX52 265 aa9.66□□□□□ -0.86
LSM5-202ENST00000409292 MIGA2Q7L4E1 593 aa9.66□□□□□ -0.86
LSM5-202ENST00000409292 ZSCAN29Q8IWY8 852 aaPredicted RBP9.66□□□□□ -0.86
LSM5-202ENST00000409292 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
LSM5-202ENST00000409292 LPIN2Q92539 896 aa9.66□□□□□ -0.86
LSM5-202ENST00000409292 LDHBP07195 334 aaKnown RBP9.65□□□□□ -0.86
LSM5-202ENST00000409292 CCL5P13501 91 aa9.65□□□□□ -0.86
LSM5-202ENST00000409292 OSBPP22059 807 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms