RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 Q6ZUG5 572 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 ADGRA1Q86SQ6 560 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 SNED1Q8TER0 1413 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 EPB41L4AQ9HCS5 686 aaPredicted RBP11.56□□□□□ -0.56
POLR1A-202ENST00000409024 ARPP21Q9UBL0 812 aaPredicted RBP11.56□□□□□ -0.56
POLR1A-202ENST00000409024 TAOK2Q9UL54 1235 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 TAF6LQ9Y6J9 622 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 GAKO14976 1311 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
POLR1A-202ENST00000409024 CPA1P15085 419 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 KIAA2012Q0VF49 1180 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 ME3Q16798 604 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 MFSD6Q6ZSS7 791 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 RGS22Q8NE09 1264 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
POLR1A-202ENST00000409024 SLX4Q8IY92 1834 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 PRC1O43663 620 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 PRKAB2O43741 272 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 PFKFB2O60825 505 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 PDCP20941 246 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 LIFRP42702 1097 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 MMP14P50281 582 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 HAND2P61296 217 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 GTF2IP78347 998 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 PPARAQ07869 468 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 SART3Q15020 963 aaKnown RBP11.54□□□□□ -0.56
POLR1A-202ENST00000409024 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 AMOTL1Q8IY63 956 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
POLR1A-202ENST00000409024 GBP4Q96PP9 640 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
POLR1A-202ENST00000409024 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 DHX16O60231 1041 aaKnown RBP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 RCAN1P53805 252 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 DYNLL1P63167 89 aaKnown RBP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 NFKBIBQ15653 356 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 TBC1D10CQ8IV04 446 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 ESR2Q92731 530 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 BRF1Q92994 677 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 GTF3C6Q969F1 213 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 DCP1AQ9NPI6 582 aaPredicted RBP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 AATFQ9NY61 560 aaKnown RBP eCLIP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 ANGEL1Q9UNK9 670 aaKnown RBP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 KIF3AQ9Y496 699 aa11.53□□□□□ -0.56
POLR1A-202ENST00000409024 WDR33Q9C0J8 1336 aaKnown RBP11.53□□□□□ -0.56
POLR1A-202ENST00000409024 USP17L3A6NCW0 530 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 USP17L4A6NCW7 530 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 ORC4O43929 436 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 USP5P45974 858 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 HMGN5P82970 282 aaKnown RBP11.52□□□□□ -0.57
POLR1A-202ENST00000409024 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
POLR1A-202ENST00000409024 USP17L1Q7RTZ2 530 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 SGMS1Q86VZ5 419 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 SDR42E1Q8WUS8 393 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 MYO3BQ8WXR4 1341 aa11.52□□□□□ -0.57
POLR1A-202ENST00000409024 ERICH2A1L162 156 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 ECE2O60344 883 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 BRD1O95696 1058 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 PDIA3P30101 505 aaKnown RBP11.51□□□□□ -0.57
POLR1A-202ENST00000409024 BTDP43251 543 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 ANTXR2P58335 489 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 PDE4BQ07343 736 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 CCDC83Q8IWF9 413 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
POLR1A-202ENST00000409024 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 USP17L21D6R901 530 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 GOLGA6L22H0YM25 854 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
POLR1A-202ENST00000409024 C21orf2O43822 256 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
POLR1A-202ENST00000409024 LARGE1O95461 756 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 DEFB115Q30KQ5 88 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 DACT2Q5SW24 774 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 C12orf60Q5U649 245 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 SMARCC2Q8TAQ2 1214 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 IGDCC4Q8TDY8 1250 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 TNPO1Q92973 898 aaKnown RBP11.5□□□□□ -0.57
POLR1A-202ENST00000409024 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
POLR1A-202ENST00000409024 ZDHHC15Q96MV8 337 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms