RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 TNNI3KQ59H18 835 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 SH3BP5LQ7L8J4 393 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 DZIP1Q86YF9 867 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 DDX4Q9NQI0 724 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 FPGT-TNNI3KV9GXZ4 949 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 PDS5AQ29RF7 1337 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 NCLP19338 710 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 INPP5BP32019 993 aa11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 CAP1Q01518 475 aa11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 ATRNL1Q5VV63 1379 aa11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 RPAP1Q9BWH6 1393 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-202ENST00000409020 LAMB1P07942 1786 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 UNCXA6NJT0 531 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 BTDP43251 543 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 RGS3P49796 1198 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 C20orf194Q5TEA3 1177 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 NSUN4Q96CB9 384 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 EXOC6BQ9Y2D4 811 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 COG6Q9Y2V7 657 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 MROH7-TTC4A0A0A0MT08 1334 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 MYH2Q9UKX2 1941 aa11.85□□□□□ -0.51
NIF3L1-202ENST00000409020 RHBDL3P58872 404 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CRHR2Q13324 411 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 PICALMQ13492 652 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 ZGPATQ8N5A5 531 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CFHR5Q9BXR6 569 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 PRDM4Q9UKN5 801 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CSADQ9Y600 493 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CCL15-CCL14A0A0B4J2E2 113 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 DDTLA6NHG4 134 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 IRF6O14896 467 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 CCL15Q16663 113 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 RAI14Q9P0K7 980 aa11.84□□□□□ -0.51
NIF3L1-202ENST00000409020 GPR75-ASB3A0A0A6YYF3 556 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 INHBEP58166 350 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
NIF3L1-202ENST00000409020 FKTNO75072 461 aa11.82□□□□□ -0.52
NIF3L1-202ENST00000409020 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-202ENST00000409020 ZAP70P43403 619 aa11.82□□□□□ -0.52
NIF3L1-202ENST00000409020 SPTY2D1Q68D10 685 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-202ENST00000409020 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-202ENST00000409020 ZNF112Q9UJU3 913 aa11.82□□□□□ -0.52
NIF3L1-202ENST00000409020 FAM196BA6NMK8 535 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 APBB1O00213 710 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 ALDH1A1P00352 501 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 HSP90AA1P07900 732 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 UQCRFS1P1P0C7P4 283 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 DCAF15Q66K64 600 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 ERO1BQ86YB8 467 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 ENTPD3O75355 529 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 GTF2A2P52657 109 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 SOX10P56693 466 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 NOM1Q5C9Z4 860 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 CD99L2Q8TCZ2 262 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 SH3RF3Q8TEJ3 882 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 LRP2BPQ9P2M1 347 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
NIF3L1-202ENST00000409020 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 BTBD19C9JJ37 291 aa11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 PPIL2Q13356 520 aa11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 MOGSQ13724 837 aa11.8□□□□□ -0.52
NIF3L1-202ENST00000409020 CCDC158Q5M9N0 1113 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms