RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 CARMIL3Q8ND23 1372 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 CHMP2AO43633 222 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 ERLIN2O94905 339 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 SYKP43405 635 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
GABPA-202ENST00000400075 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 BIN1O00499 593 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 SPA17Q15506 151 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 RRAGBQ5VZM2 374 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 GLG1Q92896 1179 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
GABPA-202ENST00000400075 DDX19AQ9NUU7 478 aaKnown RBP16.36■□□□□ 0.21
GABPA-202ENST00000400075 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
GABPA-202ENST00000400075 LPXNO60711 386 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 AFMP43652 599 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
GABPA-202ENST00000400075 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 JAKMIP3Q5VZ66 844 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 DNM2P50570 870 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 PPARAQ07869 468 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 EAF2Q96CJ1 260 aaPredicted RBP16.35■□□□□ 0.21
GABPA-202ENST00000400075 TRIM6Q9C030 488 aaPredicted RBP16.35■□□□□ 0.21
GABPA-202ENST00000400075 AGLP35573 1532 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 PPP2R5BQ15173 497 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 BARGINQ6ZT62 677 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 NLRX1Q86UT6 975 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 PRKAG2Q9UGJ0 569 aa16.35■□□□□ 0.21
GABPA-202ENST00000400075 USP14P54578 494 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 DEXIO95424 95 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 HLFQ16534 295 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
GABPA-202ENST00000400075 ADCY7P51828 1080 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 NFIXQ14938 502 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
GABPA-202ENST00000400075 MARCH10Q8NA82 808 aaPredicted RBP16.34■□□□□ 0.21
GABPA-202ENST00000400075 BSDC1Q9NW68 430 aaPredicted RBP16.34■□□□□ 0.21
GABPA-202ENST00000400075 CPSF1Q10570 1443 aaKnown RBP16.34■□□□□ 0.21
GABPA-202ENST00000400075 MARCKSP29966 332 aaPredicted RBP16.34■□□□□ 0.21
GABPA-202ENST00000400075 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
GABPA-202ENST00000400075 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.21
GABPA-202ENST00000400075 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.21
GABPA-202ENST00000400075 GPBP1L1Q9HC44 474 aaPredicted RBP16.33■□□□□ 0.21
GABPA-202ENST00000400075 CIAO1O76071 339 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 SPOUT1Q5T280 376 aaKnown RBP16.33■□□□□ 0.2
GABPA-202ENST00000400075 IFT74Q96LB3 600 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 AOX1Q06278 1338 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 MYCP01106 439 aaPredicted RBP16.33■□□□□ 0.2
GABPA-202ENST00000400075 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 OTUD7AQ8TE49 926 aaPredicted RBP16.33■□□□□ 0.2
GABPA-202ENST00000400075 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 MYO3BQ8WXR4 1341 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
GABPA-202ENST00000400075 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 NEFHP12036 1026 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 HARSP12081 509 aaKnown RBP16.32■□□□□ 0.2
GABPA-202ENST00000400075 DHX36Q9H2U1 1008 aaKnown RBP16.32■□□□□ 0.2
GABPA-202ENST00000400075 MRPL11Q9Y3B7 192 aaKnown RBP16.32■□□□□ 0.2
GABPA-202ENST00000400075 MACROD2A1Z1Q3 448 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 MCM4P33991 863 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 SMTNP53814 917 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 RUFY3Q7L099 469 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
GABPA-202ENST00000400075 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
GABPA-202ENST00000400075 EZH2Q15910 746 aaKnown RBP16.32■□□□□ 0.2
GABPA-202ENST00000400075 DDX39AO00148 427 aaKnown RBP16.31■□□□□ 0.2
GABPA-202ENST00000400075 HAUS3Q68CZ6 603 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
GABPA-202ENST00000400075 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 SERPINB13Q9UIV8 391 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 SOS2Q07890 1332 aaPredicted RBP16.31■□□□□ 0.2
GABPA-202ENST00000400075 PSMA7O14818 248 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 ARHGEF16Q5VV41 709 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 EP400NLQ6ZTU2 488 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
GABPA-202ENST00000400075 AK2P54819 239 aa16.31■□□□□ 0.2
GABPA-202ENST00000400075 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
GABPA-202ENST00000400075 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
GABPA-202ENST00000400075 CHRNA5P30532 468 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms