RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 CLIC4Q9Y696 253 aa17.52■□□□□ 0.39
COL25A1-203ENST00000399132 THSD7AQ9UPZ6 1657 aa17.52■□□□□ 0.39
COL25A1-203ENST00000399132 USP17L12C9JPN9 530 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 USP17L21D6R901 530 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 OFD1O75665 1012 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 SERPINB2P05120 415 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 DIXDC1Q155Q3 683 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 NSUN4Q96CB9 384 aaKnown RBP17.51■□□□□ 0.39
COL25A1-203ENST00000399132 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 GNL2Q13823 731 aaKnown RBP17.51■□□□□ 0.39
COL25A1-203ENST00000399132 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
COL25A1-203ENST00000399132 NMT2O60551 498 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 GNAT2P19087 354 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 WTAPQ15007 396 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 ALX1Q15699 326 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 OLFM4Q6UX06 510 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 PIBF1Q8WXW3 757 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 ANKRD2Q9GZV1 360 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 DZIP1Q86YF9 867 aaKnown RBP17.5■□□□□ 0.39
COL25A1-203ENST00000399132 CCAR1Q8IX12 1150 aaKnown RBP17.5■□□□□ 0.39
COL25A1-203ENST00000399132 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 GOLPH3LQ9H4A5 285 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 SCN7AQ01118 1682 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 NHSQ6T4R5 1651 aa17.5■□□□□ 0.39
COL25A1-203ENST00000399132 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
COL25A1-203ENST00000399132 ERICH2A1L162 156 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 TERF1P54274 439 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 FAM47AQ5JRC9 791 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 TMEM87BQ96K49 555 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 KRT23Q9C075 422 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 FAM217BQ9NTX9 383 aaPredicted RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 C4BP0C0L5 1744 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 ELP1O95163 1332 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 LAMB2P55268 1798 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 IARSP41252 1262 aaKnown RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 GRAPQ13588 217 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 SYNE3Q6ZMZ3 975 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 PROM2Q8N271 834 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 GRAPLQ8TC17 118 aaPredicted RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 CASZ1Q86V15 1759 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 MARCKSP29966 332 aaPredicted RBP17.49■□□□□ 0.39
COL25A1-203ENST00000399132 GPSM2P81274 684 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 STAG1Q8WVM7 1258 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 PPP1R9BQ96SB3 815 aa17.49■□□□□ 0.39
COL25A1-203ENST00000399132 UFL1O94874 794 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 UTP14CQ5TAP6 766 aaKnown RBP17.48■□□□□ 0.39
COL25A1-203ENST00000399132 MSL1Q68DK7 614 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 ARID3AQ99856 593 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 A0A1B0GVL5 298 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 DDR1Q08345 913 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
COL25A1-203ENST00000399132 BAZ2AQ9UIF9 1905 aaKnown RBP17.48■□□□□ 0.39
COL25A1-203ENST00000399132 TNKSO95271 1327 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
COL25A1-203ENST00000399132 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 DMTNQ08495 405 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 SART3Q15020 963 aaKnown RBP17.47■□□□□ 0.39
COL25A1-203ENST00000399132 STK38Q15208 465 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 KRT40Q6A162 431 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
COL25A1-203ENST00000399132 RIMBP2O15034 1052 aa17.47■□□□□ 0.39
COL25A1-203ENST00000399132 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
COL25A1-203ENST00000399132 USP17L8P0C7I0 530 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 ST5P78524 1137 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.46■□□□□ 0.39
COL25A1-203ENST00000399132 LUZP1Q86V48 1076 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 KIF23Q02241 960 aaPredicted RBP17.46■□□□□ 0.39
COL25A1-203ENST00000399132 NTRK3Q16288 839 aa17.46■□□□□ 0.39
COL25A1-203ENST00000399132 ZNF830Q96NB3 372 aaPredicted RBP17.46■□□□□ 0.39
COL25A1-203ENST00000399132 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
COL25A1-203ENST00000399132 CCDC192P0DO97 292 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 TYRO3Q06418 890 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 RTN1Q16799 776 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 MYSM1Q5VVJ2 828 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 RCOR1Q9UKL0 485 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 SBF2Q86WG5 1849 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
COL25A1-203ENST00000399132 ANO6Q4KMQ2 910 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 ZNF654Q8IZM8 581 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 ESR2Q92731 530 aa17.45■□□□□ 0.38
COL25A1-203ENST00000399132 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms