RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 PARP10Q53GL7 1025 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 WASF1Q92558 559 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 MBD4O95243 580 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 TNNT1P13805 278 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 CCZ1BP86790 482 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 CCZ1P86791 482 aaPredicted RBP13.16□□□□□ -0.3
C4orf3-201ENST00000399075 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 MAGEB6Q8N7X4 407 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
C4orf3-201ENST00000399075 C16orf45Q96MC5 204 aaPredicted RBP13.16□□□□□ -0.3
C4orf3-201ENST00000399075 CCDC94Q9BW85 323 aaPredicted RBP13.16□□□□□ -0.3
C4orf3-201ENST00000399075 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
C4orf3-201ENST00000399075 A0A087WWV3 80 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 AKNAD1Q5T1N1 836 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 SKILP12757 684 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 IFNAR1P17181 557 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 SYKP43405 635 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 SUSD4Q5VX71 490 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
C4orf3-201ENST00000399075 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
C4orf3-201ENST00000399075 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 CUTAO60888 179 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 GNL2Q13823 731 aaKnown RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 TSC1Q92574 1164 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 PHKBQ93100 1093 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 ZSWIM5Q9P217 1185 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 KCNJ6P48051 423 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 NCAPHQ15003 741 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 MYO1BO43795 1136 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
C4orf3-201ENST00000399075 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
C4orf3-201ENST00000399075 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
C4orf3-201ENST00000399075 RXRAP19793 462 aa13.13□□□□□ -0.31
C4orf3-201ENST00000399075 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
C4orf3-201ENST00000399075 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
C4orf3-201ENST00000399075 SART3Q15020 963 aaKnown RBP13.13□□□□□ -0.31
C4orf3-201ENST00000399075 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
C4orf3-201ENST00000399075 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
C4orf3-201ENST00000399075 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
C4orf3-201ENST00000399075 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
C4orf3-201ENST00000399075 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
C4orf3-201ENST00000399075 KIF2AO00139 706 aaPredicted RBP13.12□□□□□ -0.31
C4orf3-201ENST00000399075 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
C4orf3-201ENST00000399075 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
C4orf3-201ENST00000399075 CEP135Q66GS9 1140 aa13.12□□□□□ -0.31
C4orf3-201ENST00000399075 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
C4orf3-201ENST00000399075 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
C4orf3-201ENST00000399075 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
C4orf3-201ENST00000399075 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
C4orf3-201ENST00000399075 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
C4orf3-201ENST00000399075 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
C4orf3-201ENST00000399075 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 A0A1B0GUL6 1792 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 NTSR2O95665 410 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 MMP1P03956 469 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
C4orf3-201ENST00000399075 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 LCORLQ8N3X6 602 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
C4orf3-201ENST00000399075 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 NRAPQ86VF7 1730 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 TDO2P48775 406 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
C4orf3-201ENST00000399075 RTN1Q16799 776 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 FBXW7Q969H0 707 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
C4orf3-201ENST00000399075 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
C4orf3-201ENST00000399075 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
C4orf3-201ENST00000399075 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms