RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 SCYL3Q8IZE3 742 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 TMEM106CQ9BVX2 250 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 HMG20BQ9P0W2 317 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 ZSWIM8A7E2V4 1837 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 CXCL11O14625 94 aa17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 PRMT2P55345 433 aa17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 SH3BP5LQ7L8J4 393 aa17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 TMEM57Q8N5G2 664 aa17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 PARK7Q99497 189 aaKnown RBP17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 CPA4Q9UI42 421 aa17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.6■□□□□ 0.41
SNRNP25-203ENST00000397876 KIAA0100Q14667 2235 aaKnown RBP17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 ADGRA2Q96PE1 1338 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 LDHCP07864 332 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 UQCRFS1P1P0C7P4 283 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 MOGSQ13724 837 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 PI16Q6UXB8 463 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 RAI14Q9P0K7 980 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
SNRNP25-203ENST00000397876 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 PTPRAP18433 802 aa17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 RHBDL3P58872 404 aa17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 MAP3K10Q02779 954 aa17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 NSUN4Q96CB9 384 aaKnown RBP17.58■□□□□ 0.4
SNRNP25-203ENST00000397876 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 CTNND1O60716 968 aaKnown RBP17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 EN2P19622 333 aaPredicted RBP17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 MCAMP43121 646 aa17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 ZNF384Q8TF68 577 aa17.57■□□□□ 0.4
SNRNP25-203ENST00000397876 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 MAST2Q6P0Q8 1798 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 FMNL1O95466 1100 aaPredicted RBP17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 HOXD10P28358 340 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 PSMC4P43686 418 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 POLA2Q14181 598 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 GPAT2Q6NUI2 795 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 GADL1Q6ZQY3 521 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 SH3TC2Q8TF17 1288 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 GPR108Q9NPR9 543 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 LRP2BPQ9P2M1 347 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 AFG3L2Q9Y4W6 797 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 CENPFP49454 3210 aa17.56■□□□□ 0.4
SNRNP25-203ENST00000397876 CYP2C8P10632 490 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 TNNI3KQ59H18 835 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 TRIM47Q96LD4 638 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 SRRDQ9UH36 339 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 FPGT-TNNI3KV9GXZ4 949 aa17.55■□□□□ 0.4
SNRNP25-203ENST00000397876 TBC1D12O60347 775 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 OSBPP22059 807 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 CCDC158Q5M9N0 1113 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 TEX11Q8IYF3 940 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 OSBPL5Q9H0X9 879 aaPredicted RBP17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 SLC45A1Q9Y2W3 748 aa17.54■□□□□ 0.4
SNRNP25-203ENST00000397876 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 PTPRFP10586 1907 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 TRIM75PA6NK02 468 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 BCRP11274 1271 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 CTGFP29279 349 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 FCGRTP55899 365 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
SNRNP25-203ENST00000397876 FAM196BA6NMK8 535 aa17.52■□□□□ 0.4
SNRNP25-203ENST00000397876 BAG3O95817 575 aa17.52■□□□□ 0.4
SNRNP25-203ENST00000397876 NAA16Q6N069 864 aaPredicted RBP17.52■□□□□ 0.4
SNRNP25-203ENST00000397876 SMCR8Q8TEV9 937 aaPredicted RBP17.52■□□□□ 0.4
SNRNP25-203ENST00000397876 SNRKQ9NRH2 765 aa17.52■□□□□ 0.4
SNRNP25-203ENST00000397876 PLCG2P16885 1265 aa17.51■□□□□ 0.39
SNRNP25-203ENST00000397876 GRK4P32298 578 aa17.51■□□□□ 0.39
SNRNP25-203ENST00000397876 CCDC84Q86UT8 332 aaPredicted RBP17.51■□□□□ 0.39
SNRNP25-203ENST00000397876 MIER1Q8N108 512 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms