RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 RTL9Q8NET4 1388 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 PASKQ96RG2 1323 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 AXIN1O15169 862 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 EIF6P56537 245 aaKnown RBP7.86□□□□□ -1.15
PTPN20-208ENST00000395727 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 TWISTNBQ3B726 338 aaPredicted RBP7.86□□□□□ -1.15
PTPN20-208ENST00000395727 TRAF7Q6Q0C0 670 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 LARGE2Q8N3Y3 721 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 TSPYL6Q8N831 410 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 KLRG1Q96E93 195 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 STK31Q9BXU1 1019 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 COL4A1P02462 1669 aa7.86□□□□□ -1.15
PTPN20-208ENST00000395727 FANCIQ9NVI1 1328 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 ATP5J2-PTCD1G3V325 749 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
PTPN20-208ENST00000395727 ST8SIA5O15466 376 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 EPHX2P34913 555 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 MAP7D1Q3KQU3 841 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 DPP8Q6V1X1 898 aaPredicted RBP7.85□□□□□ -1.15
PTPN20-208ENST00000395727 KSR2Q6VAB6 950 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 Q6ZVU0 165 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 NIM1KQ8IY84 436 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 PLPP7Q8NBV4 271 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 TSR2Q969E8 191 aaKnown RBP7.85□□□□□ -1.15
PTPN20-208ENST00000395727 FAM89AQ96GI7 184 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 CWC25Q9NXE8 425 aaPredicted RBP7.85□□□□□ -1.15
PTPN20-208ENST00000395727 PODXL2Q9NZ53 605 aa7.85□□□□□ -1.15
PTPN20-208ENST00000395727 ZNF521Q96K83 1311 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 MYH3P11055 1940 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 ELL2O00472 640 aaPredicted RBP7.84□□□□□ -1.15
PTPN20-208ENST00000395727 PPIP5K2O43314 1243 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 PDE8AO60658 829 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
PTPN20-208ENST00000395727 SCTRP47872 440 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 SCNN1DP51172 638 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 TBC1D9Q6ZT07 1266 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 MEIOBQ8N635 442 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 CYLDQ9NQC7 956 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 ZNRF3Q9ULT6 936 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 DOLKQ9UPQ8 538 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 THSD7BQ9C0I4 1608 aa7.84□□□□□ -1.15
PTPN20-208ENST00000395727 TAF1P21675 1872 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 PSME4Q14997 1843 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 PI4KAP2A4QPH2 592 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 IGKV5-2P06315 115 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 SKIP12755 728 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 RPS8P62241 208 aaKnown RBP7.83□□□□□ -1.16
PTPN20-208ENST00000395727 NEXNQ0ZGT2 675 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 CBLBQ13191 982 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 AOC3Q16853 763 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 CCDC152Q4G0S7 254 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 USP50Q70EL3 339 aaPredicted RBP7.83□□□□□ -1.16
PTPN20-208ENST00000395727 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 PI4KAP1Q8N8J0 262 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 CELF1Q92879 486 aaKnown RBP7.83□□□□□ -1.16
PTPN20-208ENST00000395727 MYD88Q99836 296 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 PLA2G12BQ9BX93 195 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 C1orf115Q9H7X2 142 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 MAP3K2Q9Y2U5 619 aa7.83□□□□□ -1.16
PTPN20-208ENST00000395727 NEURL1BA8MQ27 555 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 ATP9BO43861 1147 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 VAMP4O75379 141 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 LMOD1P29536 600 aaPredicted RBP7.82□□□□□ -1.16
PTPN20-208ENST00000395727 CTSWP56202 376 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 CXCL9Q07325 125 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 TNIP1Q15025 636 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 LINS1Q8NG48 757 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 EYA3Q99504 573 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 PPP1R12CQ9BZL4 782 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 MYH16Q9H6N6 1097 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 ADARB2Q9NS39 739 aaKnown RBP7.82□□□□□ -1.16
PTPN20-208ENST00000395727 GPRC5DQ9NZD1 345 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 PGAP2Q9UHJ9 254 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 DACH1Q9UI36 760 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 CNTNAP1P78357 1384 aa7.82□□□□□ -1.16
PTPN20-208ENST00000395727 PALM3A6NDB9 673 aaPredicted RBP7.81□□□□□ -1.16
PTPN20-208ENST00000395727 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 H7C1W4 665 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 LZTS3O60299 673 aaPredicted RBP7.81□□□□□ -1.16
PTPN20-208ENST00000395727 RPS12P25398 132 aaKnown RBP7.81□□□□□ -1.16
PTPN20-208ENST00000395727 CASP7P55210 303 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 CIAPIN1Q6FI81 312 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 PLEKHM2Q8IWE5 1019 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 KDF1Q8NAX2 398 aaPredicted RBP7.81□□□□□ -1.16
PTPN20-208ENST00000395727 DNAAF4Q8WXU2 420 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 DPF2Q92785 391 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 CDC5LQ99459 802 aaKnown RBP7.81□□□□□ -1.16
PTPN20-208ENST00000395727 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
PTPN20-208ENST00000395727 TFIP11Q9UBB9 837 aaKnown RBP7.81□□□□□ -1.16
PTPN20-208ENST00000395727 XDHP47989 1333 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 ZNF646O15015 1829 aaPredicted RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 TMEM88BA6NKF7 163 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 YDJCA8MPS7 323 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 TCERG1O14776 1098 aaKnown RBP7.8□□□□□ -1.16
PTPN20-208ENST00000395727 ADH1AP07327 375 aa7.8□□□□□ -1.16
PTPN20-208ENST00000395727 GPSM2P81274 684 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms