RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 PTPRFP10586 1907 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 DOCK1Q14185 1865 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 PHIPQ8WWQ0 1821 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 TCP10Q12799 353 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 CLMNQ96JQ2 1002 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
HLA-DMA-202ENST00000395303 PLCG2P16885 1265 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 MAP3K10Q02779 954 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 SPRYD7Q5W111 196 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 DCAF15Q66K64 600 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 SLC10A4Q96EP9 437 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
HLA-DMA-202ENST00000395303 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 BAG3O95817 575 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 ZBTB48P10074 688 aaPredicted RBP16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 MAP3K9P80192 1104 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 MAP3K12Q12852 859 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 HAUS7Q99871 368 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
HLA-DMA-202ENST00000395303 TM4SF4P48230 202 aa16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 EXOC6Q8TAG9 804 aa16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 GCC1Q96CN9 775 aa16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 NOL10Q9BSC4 688 aaKnown RBP16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 AATFQ9NY61 560 aaKnown RBP eCLIP16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 PDE4DIPQ5VU43 2346 aa16.24■□□□□ 0.19
HLA-DMA-202ENST00000395303 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 CYP7A1P22680 504 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 GJA5P36382 358 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 VGLL4Q14135 290 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 SH3RF3Q8TEJ3 882 aaPredicted RBP16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 PAG1Q9NWQ8 432 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 MYH8P13535 1937 aa16.23■□□□□ 0.19
HLA-DMA-202ENST00000395303 GOLIM4O00461 696 aa16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 TBC1D12O60347 775 aa16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 MIGA2Q7L4E1 593 aa16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 WRNIP1Q96S55 665 aa16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 CSADQ9Y600 493 aa16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
HLA-DMA-202ENST00000395303 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 MANSC4A6NHS7 340 aaPredicted RBP16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 PDE6AP16499 860 aa16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 PICALMQ13492 652 aa16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 CTU1Q7Z7A3 348 aaKnown RBP16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 RIOK1Q9BRS2 568 aaKnown RBP16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 ELP3Q9H9T3 547 aa16.21■□□□□ 0.19
HLA-DMA-202ENST00000395303 TTC41PQ6P2S7 1318 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 TESPA1A2RU30 521 aaPredicted RBP16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 SPDYE5A6NIY4 337 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 SOX10P56693 466 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 INHBEP58166 350 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 SREBF2Q12772 1141 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 SLC9C2Q5TAH2 1124 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 SMC5Q8IY18 1101 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
HLA-DMA-202ENST00000395303 FLT1P17948 1338 aa16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 INPP5BP32019 993 aa16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 ERO1BQ86YB8 467 aa16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 ZSCAN29Q8IWY8 852 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 TGFBRAP1Q8WUH2 860 aa16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 ZKSCAN4Q969J2 545 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 CFHR5Q9BXR6 569 aa16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
HLA-DMA-202ENST00000395303 ADD2P35612 726 aa16.18■□□□□ 0.18
HLA-DMA-202ENST00000395303 MIGA1Q8NAN2 632 aa16.18■□□□□ 0.18
HLA-DMA-202ENST00000395303 PI4K2BQ8TCG2 481 aa16.18■□□□□ 0.18
HLA-DMA-202ENST00000395303 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
HLA-DMA-202ENST00000395303 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.18■□□□□ 0.18
HLA-DMA-202ENST00000395303 MAGEB6P1A0A0J9YX57 407 aa16.17■□□□□ 0.18
HLA-DMA-202ENST00000395303 PPATQ06203 517 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms