RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ERICH6Q7L0X2 663 aa17.47■□□□□ 0.39
SHOX-202ENST00000381575 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
SHOX-202ENST00000381575 SPATA5Q8NB90 893 aa17.47■□□□□ 0.39
SHOX-202ENST00000381575 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.39
SHOX-202ENST00000381575 POTEFA5A3E0 1075 aa17.46■□□□□ 0.39
SHOX-202ENST00000381575 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
SHOX-202ENST00000381575 MCAMP43121 646 aa17.46■□□□□ 0.39
SHOX-202ENST00000381575 SPTY2D1Q68D10 685 aaPredicted RBP17.46■□□□□ 0.39
SHOX-202ENST00000381575 FTSJ3Q8IY81 847 aaKnown RBP17.46■□□□□ 0.39
SHOX-202ENST00000381575 IDI2Q9BXS1 227 aa17.46■□□□□ 0.39
SHOX-202ENST00000381575 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
SHOX-202ENST00000381575 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.46■□□□□ 0.39
SHOX-202ENST00000381575 ENTPD3O75355 529 aa17.45■□□□□ 0.38
SHOX-202ENST00000381575 ARID4AP29374 1257 aaPredicted RBP17.45■□□□□ 0.38
SHOX-202ENST00000381575 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
SHOX-202ENST00000381575 POLA2Q14181 598 aa17.45■□□□□ 0.38
SHOX-202ENST00000381575 RAI14Q9P0K7 980 aa17.45■□□□□ 0.38
SHOX-202ENST00000381575 PTCH2Q9Y6C5 1203 aa17.45■□□□□ 0.38
SHOX-202ENST00000381575 MGAMO43451 1857 aa17.45■□□□□ 0.38
SHOX-202ENST00000381575 FAM196BA6NMK8 535 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 PHF20L1A8MW92 1017 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 ZBTB22O15209 634 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 TLR2O60603 784 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 RHBDL3P58872 404 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 NOL9Q5SY16 702 aaKnown RBP17.44■□□□□ 0.38
SHOX-202ENST00000381575 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
SHOX-202ENST00000381575 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 CPA4Q9UI42 421 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 KCNH4Q9UQ05 1017 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 CEP290O15078 2479 aa17.44■□□□□ 0.38
SHOX-202ENST00000381575 SIPA1L1O43166 1804 aa17.43■□□□□ 0.38
SHOX-202ENST00000381575 MYCP01106 439 aaPredicted RBP17.43■□□□□ 0.38
SHOX-202ENST00000381575 MOGSQ13724 837 aa17.43■□□□□ 0.38
SHOX-202ENST00000381575 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
SHOX-202ENST00000381575 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
SHOX-202ENST00000381575 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
SHOX-202ENST00000381575 DBNDD2Q9BQY9 259 aa17.43■□□□□ 0.38
SHOX-202ENST00000381575 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 PDHXO00330 501 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
SHOX-202ENST00000381575 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 TTC39AQ5SRH9 613 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 DOCK3Q8IZD9 2030 aa17.42■□□□□ 0.38
SHOX-202ENST00000381575 CTGFP29279 349 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 LACTBP83111 547 aaPredicted RBP17.41■□□□□ 0.38
SHOX-202ENST00000381575 ANKRD23Q86SG2 305 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 SCYL3Q8IZE3 742 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 ZCCHC17Q9NP64 241 aaKnown RBP17.41■□□□□ 0.38
SHOX-202ENST00000381575 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
SHOX-202ENST00000381575 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 ZHX2Q9Y6X8 837 aa17.41■□□□□ 0.38
SHOX-202ENST00000381575 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 PTPRAP18433 802 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 SLC9C1Q4G0N8 1177 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 GPAT2Q6NUI2 795 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 ZBED9Q6R2W3 1325 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 ADGRA2Q96PE1 1338 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
SHOX-202ENST00000381575 CYP2C8P10632 490 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 EN2P19622 333 aaPredicted RBP17.4■□□□□ 0.38
SHOX-202ENST00000381575 GSTO1P78417 241 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 KIF22Q14807 665 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 C17orf99Q6UX52 265 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
SHOX-202ENST00000381575 SH3TC2Q8TF17 1288 aa17.4■□□□□ 0.38
SHOX-202ENST00000381575 TRIM75PA6NK02 468 aa17.39■□□□□ 0.37
SHOX-202ENST00000381575 LDHCP07864 332 aa17.39■□□□□ 0.37
SHOX-202ENST00000381575 ZNF333Q96JL9 665 aa17.39■□□□□ 0.37
SHOX-202ENST00000381575 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
SHOX-202ENST00000381575 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
SHOX-202ENST00000381575 MYH1P12882 1939 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 CXCL11O14625 94 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
SHOX-202ENST00000381575 ZAP70P43403 619 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 MAP3K10Q02779 954 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 ARHGEF6Q15052 776 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
SHOX-202ENST00000381575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHOX-202ENST00000381575 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHOX-202ENST00000381575 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
SHOX-202ENST00000381575 AFG3L2Q9Y4W6 797 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 NDUFB9Q9Y6M9 179 aa17.38■□□□□ 0.37
SHOX-202ENST00000381575 A0A0G2JLL6 359 aaPredicted RBP17.37■□□□□ 0.37
SHOX-202ENST00000381575 CTNND1O60716 968 aaKnown RBP17.37■□□□□ 0.37
SHOX-202ENST00000381575 PSMC4P43686 418 aa17.37■□□□□ 0.37
SHOX-202ENST00000381575 RRP1BQ14684 758 aaKnown RBP17.37■□□□□ 0.37
SHOX-202ENST00000381575 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
SHOX-202ENST00000381575 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
SHOX-202ENST00000381575 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms