RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 IGHA2P01877 340 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 CDK5R2Q13319 367 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 ARHGAP27Q6ZUM4 889 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 GLIS3Q8NEA6 775 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 MKNK2Q9HBH9 465 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 VAV3Q9UKW4 847 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 PCOLCE2Q9UKZ9 415 aa7.03□□□□□ -1.28
SNAPC3-201ENST00000380799 ZNF862O60290 1169 aa7.02□□□□□ -1.29
SNAPC3-201ENST00000380799 RNGTTO60942 597 aaKnown RBP7.02□□□□□ -1.29
SNAPC3-201ENST00000380799 ZNF792Q3KQV3 632 aa7.02□□□□□ -1.29
SNAPC3-201ENST00000380799 EPS8L3Q8TE67 593 aaKnown RBP7.02□□□□□ -1.29
SNAPC3-201ENST00000380799 PAPLNO95428 1278 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 FCGRTP55899 365 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 PRKCQQ04759 706 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 TTLL4Q14679 1199 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 ZNF574Q6ZN55 896 aaPredicted RBP7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 SPRED2Q7Z698 418 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 PLD6Q8N2A8 252 aaKnown RBP7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 KCNB2Q92953 911 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 EMILIN2Q9BXX0 1053 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 SSU72Q9NP77 194 aaKnown RBP7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 PCDHGC5Q9Y5F6 944 aa7.01□□□□□ -1.29
SNAPC3-201ENST00000380799 RBM47A0AV96 593 aaKnown RBP7□□□□□ -1.29
SNAPC3-201ENST00000380799 C8AP07357 584 aa7□□□□□ -1.29
SNAPC3-201ENST00000380799 FUT4P22083 530 aa7□□□□□ -1.29
SNAPC3-201ENST00000380799 IFI16Q16666 785 aaKnown RBP7□□□□□ -1.29
SNAPC3-201ENST00000380799 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
SNAPC3-201ENST00000380799 ATG4DQ86TL0 474 aaPredicted RBP7□□□□□ -1.29
SNAPC3-201ENST00000380799 SULF2Q8IWU5 870 aa7□□□□□ -1.29
SNAPC3-201ENST00000380799 FAM181AQ8N9Y4 354 aa7□□□□□ -1.29
SNAPC3-201ENST00000380799 TMEM265A0A087WTH1 108 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 HCLS1P14317 486 aaPredicted RBP6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 ERCC3P19447 782 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 ARNTP27540 789 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 PDZD3Q86UT5 571 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 HRASLS5Q96KN8 279 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 DUSP23Q9BVJ7 150 aa6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 BIN2Q9UBW5 565 aaPredicted RBP6.99□□□□□ -1.29
SNAPC3-201ENST00000380799 NME2P22392 152 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 ERVK-24P63145 666 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 BNIP3Q12983 259 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 RNF214Q8ND24 703 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 BCO2Q9BYV7 579 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 RC3H2Q9HBD1 1191 aaKnown RBP6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 SAMM50Q9Y512 469 aa6.98□□□□□ -1.29
SNAPC3-201ENST00000380799 CEACAM5P06731 702 aa6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 CD8BP10966 210 aa6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 JAG1P78504 1218 aa6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 ZC3H12AQ5D1E8 599 aaKnown RBP6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 PI4K2BQ8TCG2 481 aa6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
SNAPC3-201ENST00000380799 OXCT1P55809 520 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 AOC3Q16853 763 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 ANGEL2Q5VTE6 544 aaKnown RBP6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 MAP1SQ66K74 1059 aaPredicted RBP6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 TMC7Q7Z402 723 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 ISL2Q96A47 359 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 MBNL3Q9NUK0 354 aaKnown RBP6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 GTF2IRD1Q9UHL9 959 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 SNX11Q9Y5W9 270 aa6.96□□□□□ -1.3
SNAPC3-201ENST00000380799 LEFTY1O75610 366 aa6.95□□□□□ -1.3
SNAPC3-201ENST00000380799 NEFMP07197 916 aa6.95□□□□□ -1.3
SNAPC3-201ENST00000380799 TOP6BLQ8N6T0 577 aa6.95□□□□□ -1.3
SNAPC3-201ENST00000380799 CEP44Q9C0F1 390 aa6.95□□□□□ -1.3
SNAPC3-201ENST00000380799 SRCIN1Q9C0H9 1055 aa6.95□□□□□ -1.3
SNAPC3-201ENST00000380799 FARP2O94887 1054 aaPredicted RBP6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 RNASE1P07998 156 aaKnown RBP6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 PLCB3Q01970 1234 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 PI16Q6UXB8 463 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 TMEM40Q8WWA1 233 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 FAM168AQ92567 244 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 CBX8Q9HC52 389 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 PICK1Q9NRD5 415 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 PPM1HQ9ULR3 514 aa6.94□□□□□ -1.3
SNAPC3-201ENST00000380799 PNMA6FA0A0J9YX94 578 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 IGSF3O75054 1194 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 GSTT1P30711 240 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 ZNF252P-AS1Q0IIN9 211 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 ENOX2Q16206 610 aaKnown RBP6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 PKN1Q16512 942 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 SCARA3Q6AZY7 606 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 SLC23A3Q6PIS1 610 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 NXPE4Q6UWF7 544 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 GPBAR1Q8TDU6 330 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 ASB11Q8WXH4 323 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 BCL2L13Q9BXK5 485 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 TNKS2Q9H2K2 1166 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
SNAPC3-201ENST00000380799 ANKRD33BA6NCL7 494 aa6.92□□□□□ -1.3
SNAPC3-201ENST00000380799 IGF2BP3O00425 579 aaKnown RBP eCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms