RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CAP1Q01518 475 aa21.25■□□□□ 0.99
HMGN1-204ENST00000380749 ANKRD23Q86SG2 305 aa21.25■□□□□ 0.99
HMGN1-204ENST00000380749 TMEM57Q8N5G2 664 aa21.25■□□□□ 0.99
HMGN1-204ENST00000380749 ARID4AP29374 1257 aaPredicted RBP21.24■□□□□ 0.99
HMGN1-204ENST00000380749 GSTO1P78417 241 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 LACTBP83111 547 aaPredicted RBP21.24■□□□□ 0.99
HMGN1-204ENST00000380749 MECOMQ03112 1051 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 SLC9C1Q4G0N8 1177 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 ZFPM1Q8IX07 1006 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
HMGN1-204ENST00000380749 SPATA5Q8NB90 893 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 PICK1Q9NRD5 415 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 HMG20BQ9P0W2 317 aa21.24■□□□□ 0.99
HMGN1-204ENST00000380749 SLC34A2O95436 690 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 PICALMQ13492 652 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 NBPF11Q86T75 865 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 SCYL3Q8IZE3 742 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 PTCH2Q9Y6C5 1203 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-204ENST00000380749 PDHXO00330 501 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 GNRH1P01148 92 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 LDHCP07864 332 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 UQCRFS1P1P0C7P4 283 aa21.23■□□□□ 0.99
HMGN1-204ENST00000380749 OS9Q13438 667 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-204ENST00000380749 COL2A1P02458 1487 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-204ENST00000380749 DOCK3Q8IZD9 2030 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 GPR75-ASB3A0A0A6YYF3 556 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 POTEFA5A3E0 1075 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 CXCL11O14625 94 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 ZNF333Q96JL9 665 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 PARK7Q99497 189 aaKnown RBP21.22■□□□□ 0.99
HMGN1-204ENST00000380749 TMEM106CQ9BVX2 250 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 DDX4Q9NQI0 724 aaKnown RBP21.22■□□□□ 0.99
HMGN1-204ENST00000380749 RAI14Q9P0K7 980 aa21.22■□□□□ 0.99
HMGN1-204ENST00000380749 LOC285556D6RIA3 1793 aa21.21■□□□□ 0.99
HMGN1-204ENST00000380749 PHF20L1A8MW92 1017 aa21.21■□□□□ 0.99
HMGN1-204ENST00000380749 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-204ENST00000380749 PRMT2P55345 433 aa21.21■□□□□ 0.99
HMGN1-204ENST00000380749 SH3BP5LQ7L8J4 393 aa21.21■□□□□ 0.99
HMGN1-204ENST00000380749 NSUN4Q96CB9 384 aaKnown RBP21.21■□□□□ 0.99
HMGN1-204ENST00000380749 ARHGAP39Q9C0H5 1083 aa21.21■□□□□ 0.99
HMGN1-204ENST00000380749 SIPA1L1O43166 1804 aa21.2■□□□□ 0.98
HMGN1-204ENST00000380749 MYH1P12882 1939 aa21.2■□□□□ 0.98
HMGN1-204ENST00000380749 DDTLA6NHG4 134 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-204ENST00000380749 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
HMGN1-204ENST00000380749 MCAMP43121 646 aa21.2■□□□□ 0.98
HMGN1-204ENST00000380749 C17orf99Q6UX52 265 aa21.2■□□□□ 0.98
HMGN1-204ENST00000380749 GPR108Q9NPR9 543 aa21.2■□□□□ 0.98
HMGN1-204ENST00000380749 CPA4Q9UI42 421 aa21.2■□□□□ 0.98
HMGN1-204ENST00000380749 ADGRA2Q96PE1 1338 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 RHBDL3P58872 404 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 MAP3K10Q02779 954 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 MOGSQ13724 837 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 POLA2Q14181 598 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 TBC1D9Q6ZT07 1266 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 FASTKD5Q7L8L6 764 aaKnown RBP21.19■□□□□ 0.98
HMGN1-204ENST00000380749 ITPRIPQ8IWB1 547 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 ZNF384Q8TF68 577 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 NOL10Q9BSC4 688 aaKnown RBP21.19■□□□□ 0.98
HMGN1-204ENST00000380749 LRP2BPQ9P2M1 347 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 ZHX2Q9Y6X8 837 aa21.19■□□□□ 0.98
HMGN1-204ENST00000380749 A0A0G2JLL6 359 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-204ENST00000380749 CTNND1O60716 968 aaKnown RBP21.18■□□□□ 0.98
HMGN1-204ENST00000380749 PTPRAP18433 802 aa21.18■□□□□ 0.98
HMGN1-204ENST00000380749 TNNI3KQ59H18 835 aa21.18■□□□□ 0.98
HMGN1-204ENST00000380749 TTC39AQ5SRH9 613 aa21.18■□□□□ 0.98
HMGN1-204ENST00000380749 PRRT2Q7Z6L0 340 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-204ENST00000380749 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
HMGN1-204ENST00000380749 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
HMGN1-204ENST00000380749 CCDC158Q5M9N0 1113 aa21.17■□□□□ 0.98
HMGN1-204ENST00000380749 MIER1Q8N108 512 aa21.17■□□□□ 0.98
HMGN1-204ENST00000380749 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
HMGN1-204ENST00000380749 TBC1D12O60347 775 aa21.16■□□□□ 0.98
HMGN1-204ENST00000380749 SURF6O75683 361 aaKnown RBP21.16■□□□□ 0.98
HMGN1-204ENST00000380749 HOXD10P28358 340 aa21.16■□□□□ 0.98
HMGN1-204ENST00000380749 ATP8B2P98198 1209 aa21.16■□□□□ 0.98
HMGN1-204ENST00000380749 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
HMGN1-204ENST00000380749 GADL1Q6ZQY3 521 aa21.16■□□□□ 0.98
HMGN1-204ENST00000380749 TEX11Q8IYF3 940 aa21.16■□□□□ 0.98
HMGN1-204ENST00000380749 AFG3L2Q9Y4W6 797 aa21.16■□□□□ 0.98
HMGN1-204ENST00000380749 ECM2O94769 699 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-204ENST00000380749 PSMC4P43686 418 aa21.15■□□□□ 0.98
HMGN1-204ENST00000380749 SLC4A8Q2Y0W8 1093 aa21.15■□□□□ 0.98
HMGN1-204ENST00000380749 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
HMGN1-204ENST00000380749 OSBPL5Q9H0X9 879 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-204ENST00000380749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.15■□□□□ 0.98
HMGN1-204ENST00000380749 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
HMGN1-204ENST00000380749 FMNL1O95466 1100 aaPredicted RBP21.14■□□□□ 0.98
HMGN1-204ENST00000380749 CYP2C8P10632 490 aa21.14■□□□□ 0.98
HMGN1-204ENST00000380749 EN2P19622 333 aaPredicted RBP21.14■□□□□ 0.98
HMGN1-204ENST00000380749 NAA16Q6N069 864 aaPredicted RBP21.14■□□□□ 0.98
HMGN1-204ENST00000380749 GPAT2Q6NUI2 795 aa21.14■□□□□ 0.98
HMGN1-204ENST00000380749 SH3TC2Q8TF17 1288 aa21.14■□□□□ 0.98
HMGN1-204ENST00000380749 TRIM47Q96LD4 638 aa21.14■□□□□ 0.98
HMGN1-204ENST00000380749 SRRDQ9UH36 339 aa21.14■□□□□ 0.98
HMGN1-204ENST00000380749 SLC45A1Q9Y2W3 748 aa21.14■□□□□ 0.98
HMGN1-204ENST00000380749 BAG3O95817 575 aa21.13■□□□□ 0.97
HMGN1-204ENST00000380749 RAET1EQ8TD07 263 aa21.13■□□□□ 0.97
HMGN1-204ENST00000380749 SNRKQ9NRH2 765 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms