RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MTX1Q13505 466 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 KIF22Q14807 665 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 GPAT2Q6NUI2 795 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 ZNF384Q8TF68 577 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 DDX4Q9NQI0 724 aaKnown RBP23.75■■□□□ 1.39
CBWD3-204ENST00000377349 HDAC5Q9UQL6 1122 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 TNNQ9UQP3 1299 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 ENTPD3O75355 529 aa23.74■■□□□ 1.39
CBWD3-204ENST00000377349 ARHGAP45Q92619 1136 aa23.74■■□□□ 1.39
CBWD3-204ENST00000377349 GCC1Q96CN9 775 aa23.74■■□□□ 1.39
CBWD3-204ENST00000377349 FAM163AQ96GL9 167 aaPredicted RBP23.74■■□□□ 1.39
CBWD3-204ENST00000377349 A0A1B0GUL7 405 aa23.73■■□□□ 1.39
CBWD3-204ENST00000377349 ECM2O94769 699 aaPredicted RBP23.73■■□□□ 1.39
CBWD3-204ENST00000377349 MYCP01106 439 aaPredicted RBP23.73■■□□□ 1.39
CBWD3-204ENST00000377349 PRMT2P55345 433 aa23.73■■□□□ 1.39
CBWD3-204ENST00000377349 TFCP2Q12800 502 aa23.73■■□□□ 1.39
CBWD3-204ENST00000377349 ZGPATQ8N5A5 531 aaKnown RBP23.73■■□□□ 1.39
CBWD3-204ENST00000377349 DDTLA6NHG4 134 aaPredicted RBP23.72■■□□□ 1.39
CBWD3-204ENST00000377349 CXCL11O14625 94 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 SRGAP3O43295 1099 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 TRIM27P14373 513 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 PSMC4P43686 418 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 SLC4A8Q2Y0W8 1093 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 SCYL3Q8IZE3 742 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 XAGE2Q96GT9 111 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 SRRDQ9UH36 339 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 SIPA1L1O43166 1804 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 SZT2Q5T011 3432 aa23.72■■□□□ 1.39
CBWD3-204ENST00000377349 GNAI3P08754 354 aa23.71■■□□□ 1.39
CBWD3-204ENST00000377349 BCRP11274 1271 aa23.71■■□□□ 1.39
CBWD3-204ENST00000377349 PTPRAP18433 802 aa23.71■■□□□ 1.39
CBWD3-204ENST00000377349 OSBPP22059 807 aa23.71■■□□□ 1.39
CBWD3-204ENST00000377349 HABP4Q5JVS0 413 aaKnown RBP23.71■■□□□ 1.39
CBWD3-204ENST00000377349 ATF7IPQ6VMQ6 1270 aa23.71■■□□□ 1.39
CBWD3-204ENST00000377349 DZIP1Q86YF9 867 aaKnown RBP23.71■■□□□ 1.39
CBWD3-204ENST00000377349 ABCF2Q9UG63 623 aa23.71■■□□□ 1.39
CBWD3-204ENST00000377349 FOCADQ5VW36 1801 aa23.7■■□□□ 1.39
CBWD3-204ENST00000377349 LOC285556D6RIA3 1793 aa23.7■■□□□ 1.38
CBWD3-204ENST00000377349 MROH7-TTC4A0A0A0MT08 1334 aa23.7■■□□□ 1.38
CBWD3-204ENST00000377349 A0A0G2JLL6 359 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-204ENST00000377349 BTDP43251 543 aa23.7■■□□□ 1.38
CBWD3-204ENST00000377349 RHBDL3P58872 404 aa23.7■■□□□ 1.38
CBWD3-204ENST00000377349 PRRT2Q7Z6L0 340 aaPredicted RBP23.7■■□□□ 1.38
CBWD3-204ENST00000377349 CYP2C8P10632 490 aa23.69■■□□□ 1.38
CBWD3-204ENST00000377349 MTFR1Q15390 333 aa23.69■■□□□ 1.38
CBWD3-204ENST00000377349 SHISA4Q96DD7 197 aa23.69■■□□□ 1.38
CBWD3-204ENST00000377349 AFG3L2Q9Y4W6 797 aa23.69■■□□□ 1.38
CBWD3-204ENST00000377349 GPR75-ASB3A0A0A6YYF3 556 aa23.68■■□□□ 1.38
CBWD3-204ENST00000377349 MECOMQ03112 1051 aa23.68■■□□□ 1.38
CBWD3-204ENST00000377349 PI16Q6UXB8 463 aa23.68■■□□□ 1.38
CBWD3-204ENST00000377349 PARK7Q99497 189 aaKnown RBP23.68■■□□□ 1.38
CBWD3-204ENST00000377349 ZHX2Q9Y6X8 837 aa23.68■■□□□ 1.38
CBWD3-204ENST00000377349 MAST2Q6P0Q8 1798 aa23.68■■□□□ 1.38
CBWD3-204ENST00000377349 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
CBWD3-204ENST00000377349 HMG20BQ9P0W2 317 aa23.67■■□□□ 1.38
CBWD3-204ENST00000377349 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-204ENST00000377349 AKAP2Q9Y2D5 859 aa23.67■■□□□ 1.38
CBWD3-204ENST00000377349 ZKSCAN2Q63HK3 967 aa23.67■■□□□ 1.38
CBWD3-204ENST00000377349 SPTY2D1Q68D10 685 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-204ENST00000377349 ZSCAN29Q8IWY8 852 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-204ENST00000377349 SLF2Q8IX21 1173 aa23.67■■□□□ 1.38
CBWD3-204ENST00000377349 MYPNQ86TC9 1320 aa23.66■■□□□ 1.38
CBWD3-204ENST00000377349 FMNL1O95466 1100 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-204ENST00000377349 PICALMQ13492 652 aa23.66■■□□□ 1.38
CBWD3-204ENST00000377349 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
CBWD3-204ENST00000377349 PICK1Q9NRD5 415 aa23.66■■□□□ 1.38
CBWD3-204ENST00000377349 PNMA6EA0A0J9YXQ4 647 aa23.65■■□□□ 1.38
CBWD3-204ENST00000377349 CTNND1O60716 968 aaKnown RBP23.65■■□□□ 1.38
CBWD3-204ENST00000377349 NPM3O75607 178 aaKnown RBP23.65■■□□□ 1.38
CBWD3-204ENST00000377349 GRK4P32298 578 aa23.65■■□□□ 1.38
CBWD3-204ENST00000377349 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
CBWD3-204ENST00000377349 CCDC84Q86UT8 332 aaPredicted RBP23.65■■□□□ 1.38
CBWD3-204ENST00000377349 TMEM57Q8N5G2 664 aa23.65■■□□□ 1.38
CBWD3-204ENST00000377349 NSUN4Q96CB9 384 aaKnown RBP23.65■■□□□ 1.38
CBWD3-204ENST00000377349 COL2A1P02458 1487 aaPredicted RBP23.64■■□□□ 1.38
CBWD3-204ENST00000377349 GNAI2P04899 355 aa23.64■■□□□ 1.37
CBWD3-204ENST00000377349 HOXD10P28358 340 aa23.64■■□□□ 1.37
CBWD3-204ENST00000377349 ARID4AP29374 1257 aaPredicted RBP23.64■■□□□ 1.37
CBWD3-204ENST00000377349 PRKCZQ05513 592 aa23.64■■□□□ 1.37
CBWD3-204ENST00000377349 TBC1D9Q6ZT07 1266 aa23.64■■□□□ 1.37
CBWD3-204ENST00000377349 FASTKD5Q7L8L6 764 aaKnown RBP23.64■■□□□ 1.37
CBWD3-204ENST00000377349 RAET1EQ8TD07 263 aa23.64■■□□□ 1.37
CBWD3-204ENST00000377349 SLC45A1Q9Y2W3 748 aa23.64■■□□□ 1.37
CBWD3-204ENST00000377349 TBC1D12O60347 775 aa23.63■■□□□ 1.37
CBWD3-204ENST00000377349 SPATA5Q8NB90 893 aa23.63■■□□□ 1.37
CBWD3-204ENST00000377349 NEUROD6Q96NK8 337 aa23.63■■□□□ 1.37
CBWD3-204ENST00000377349 GABRQQ9UN88 632 aa23.63■■□□□ 1.37
CBWD3-204ENST00000377349 FAM196BA6NMK8 535 aa23.62■■□□□ 1.37
CBWD3-204ENST00000377349 MCAMP43121 646 aa23.62■■□□□ 1.37
CBWD3-204ENST00000377349 GADL1Q6ZQY3 521 aa23.62■■□□□ 1.37
CBWD3-204ENST00000377349 UBE2Q1Q7Z7E8 422 aa23.62■■□□□ 1.37
CBWD3-204ENST00000377349 FCGRTP55899 365 aa23.61■■□□□ 1.37
CBWD3-204ENST00000377349 ALPK3Q96L96 1907 aa23.61■■□□□ 1.37
CBWD3-204ENST00000377349 PLXNB2O15031 1838 aa23.6■■□□□ 1.37
CBWD3-204ENST00000377349 TRIM75PA6NK02 468 aa23.6■■□□□ 1.37
CBWD3-204ENST00000377349 CCL5P13501 91 aa23.6■■□□□ 1.37
CBWD3-204ENST00000377349 FXR1P51114 621 aaKnown RBP eCLIP23.6■■□□□ 1.37
CBWD3-204ENST00000377349 ITPRIPQ8IWB1 547 aa23.6■■□□□ 1.37
CBWD3-204ENST00000377349 COLQQ9Y215 455 aaPredicted RBP23.6■■□□□ 1.37
CBWD3-204ENST00000377349 ZBED9Q6R2W3 1325 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms