RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 hCG_1642624A0A1W2PR95 340 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 USP17L12C9JPN9 530 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 USP17L21D6R901 530 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 TFAP4Q01664 338 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 PLS1Q14651 629 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 KARSQ15046 597 aaKnown RBP15.38■□□□□ 0.05
C9orf47-203ENST00000375851 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 LZTFL1Q9NQ48 299 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
C9orf47-203ENST00000375851 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 NEK11Q8NG66 645 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.38■□□□□ 0.05
C9orf47-203ENST00000375851 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-203ENST00000375851 MAP3K15Q6ZN16 1313 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 ZCCHC11Q5TAX3 1644 aaKnown RBP15.38■□□□□ 0.05
C9orf47-203ENST00000375851 GYG1P46976 350 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 FCHSD1Q86WN1 690 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 ARFGAP3Q9NP61 516 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 TMEM63CQ9P1W3 806 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 TPCN1Q9ULQ1 816 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 MAST3O60307 1309 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 CTAGE9A4FU28 777 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 PHACTR2O75167 634 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 EZRP15311 586 aaKnown RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 SRRTQ9BXP5 876 aaKnown RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 PUS3Q9BZE2 481 aaKnown RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 GUCA1BQ9UMX6 200 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 NPHP4O75161 1426 aaPredicted RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 FGAP02671 866 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
C9orf47-203ENST00000375851 CNGA4Q8IV77 575 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 TGFBRAP1Q8WUH2 860 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
C9orf47-203ENST00000375851 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 CCT6AP40227 531 aaKnown RBP15.36■□□□□ 0.05
C9orf47-203ENST00000375851 BCAMP50895 628 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 SIK1P57059 783 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 PPARAQ07869 468 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 GREM2Q9H772 168 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 SH2D4AQ9H788 454 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 KIF1BO60333 1816 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 TRAF5O00463 557 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 TXKP42681 527 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 PDE4DQ08499 809 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 MYSM1Q5VVJ2 828 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 CCDC65Q8IXS2 484 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 RASEFQ8IZ41 740 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 ZBTB21Q9ULJ3 1066 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 PDE8BO95263 885 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 FAM47AQ5JRC9 791 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 SYT10Q6XYQ8 523 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 ZNF654Q8IZM8 581 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 TBC1D22AQ8WUA7 517 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 PLVAPQ9BX97 442 aa15.36■□□□□ 0.05
C9orf47-203ENST00000375851 PKP1Q13835 747 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 MAP4K1Q92918 833 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 VPS54Q9P1Q0 977 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 CCNT1O60563 726 aaKnown RBP15.35■□□□□ 0.05
C9orf47-203ENST00000375851 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
C9orf47-203ENST00000375851 SLC1A4P43007 532 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 MAATS1Q7Z4T9 603 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 BAG1Q99933 345 aaPredicted RBP15.35■□□□□ 0.05
C9orf47-203ENST00000375851 TLR7Q9NYK1 1049 aaKnown RBP15.35■□□□□ 0.05
C9orf47-203ENST00000375851 ZBTB1Q9Y2K1 713 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 TBC1D8BQ0IIM8 1120 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
C9orf47-203ENST00000375851 MLKLQ8NB16 471 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 MTMR6Q9Y217 621 aa15.35■□□□□ 0.05
C9orf47-203ENST00000375851 AKR1B15C9JRZ8 316 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 PPP1R2P41236 205 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 VPS16Q9H269 839 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 MRVI1Q9Y6F6 885 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 ABCC3O15438 1527 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 GOLGA6L10A0A0M3HER8 536 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 H0YIN7 160 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 GCOM1H8Y6P7 765 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 MYZAPP0CAP1 466 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 ARID4AP29374 1257 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 FANCCQ00597 558 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-203ENST00000375851 ZNF569Q5MCW4 686 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 CEP112Q8N8E3 955 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 PHKA1P46020 1223 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 SP4Q02446 784 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 MCM6Q14566 821 aa15.34■□□□□ 0.05
C9orf47-203ENST00000375851 SDR42E1Q8WUS8 393 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms