RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TRAF1Q13077 416 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 B4DLN1 442 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 PSMA7O14818 248 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 KCNQ3O43525 872 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 PPARDQ03181 441 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 GEN1Q17RS7 908 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 KIF5AQ12840 1032 aa16.08■□□□□ 0.17
TRAF1-201ENST00000373887 LETM2Q2VYF4 491 aa16.08■□□□□ 0.17
TRAF1-201ENST00000373887 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 TTC41PQ6P2S7 1318 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 SORBS3O60504 671 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 CRCPO75575 148 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 AK2P54819 239 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 TGFBRAP1Q8WUH2 860 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 LMBR1Q8WVP7 490 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 SAMD15Q9P1V8 674 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.16
TRAF1-201ENST00000373887 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 DNM1Q05193 864 aaKnown RBP16.08■□□□□ 0.16
TRAF1-201ENST00000373887 PPP1R21Q6ZMI0 780 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
TRAF1-201ENST00000373887 ZNF174Q15697 407 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
TRAF1-201ENST00000373887 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.16
TRAF1-201ENST00000373887 EBAG9O00559 213 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 STIM2Q9P246 746 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 GTF2IP78347 998 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 SETDB1Q15047 1291 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 C10orf67Q8IYJ2 551 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 KLHL40Q2TBA0 621 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 EPSTI1Q96J88 318 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 ARHGEF10LQ9HCE6 1279 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 DACT1Q9NYF0 836 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
TRAF1-201ENST00000373887 GMNNO75496 209 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 NEK11Q8NG66 645 aa16.07■□□□□ 0.16
TRAF1-201ENST00000373887 OTUD7AQ8TE49 926 aaPredicted RBP16.07■□□□□ 0.16
TRAF1-201ENST00000373887 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 TAF12Q16514 161 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 KCNG4Q8TDN1 519 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 CCDC42Q96M95 316 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 KRT83P78385 493 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 MAK16Q9BXY0 300 aaKnown RBP16.06■□□□□ 0.16
TRAF1-201ENST00000373887 KRT86O43790 486 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 CIB2O75838 187 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 WDR66Q8TBY9 1149 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 PARD3Q8TEW0 1356 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 RAPGEF1Q13905 1077 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 CEP85LQ5SZL2 805 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 C2CD5Q86YS7 1000 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 STMN2Q93045 179 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 IVNS1ABPQ9Y6Y0 642 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 YEATS2Q9ULM3 1422 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 ATP2A2P16615 1042 aaKnown RBP16.06■□□□□ 0.16
TRAF1-201ENST00000373887 ERCC3P19447 782 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 SCNN1DP51172 638 aa16.06■□□□□ 0.16
TRAF1-201ENST00000373887 SYT10Q6XYQ8 523 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 MIPOL1Q8TD10 442 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 CCT6BQ92526 530 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 MYL10Q9BUA6 226 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 HGSO14964 777 aaPredicted RBP16.05■□□□□ 0.16
TRAF1-201ENST00000373887 INTS8Q75QN2 995 aaKnown RBP16.05■□□□□ 0.16
TRAF1-201ENST00000373887 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
TRAF1-201ENST00000373887 SH2D4AQ9H788 454 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 VIMP08670 466 aaKnown RBP16.05■□□□□ 0.16
TRAF1-201ENST00000373887 CEP120Q8N960 986 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
TRAF1-201ENST00000373887 HPDP32754 393 aaPredicted RBP16.04■□□□□ 0.16
TRAF1-201ENST00000373887 HSPA1LP34931 641 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 PSMD6Q15008 389 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 SATB1Q01826 763 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 RSRC1Q96IZ7 334 aaKnown RBP16.04■□□□□ 0.16
TRAF1-201ENST00000373887 DCTPP1Q9H773 170 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 GPHNQ9NQX3 736 aaPredicted RBP16.04■□□□□ 0.16
TRAF1-201ENST00000373887 CAVIN2O95810 425 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 KRT5P13647 590 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 FEZ2Q9UHY8 353 aaPredicted RBP16.04■□□□□ 0.16
TRAF1-201ENST00000373887 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 GNA11P29992 359 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 ALDH1B1P30837 517 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 SPAG1Q07617 926 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 KIAA1524Q8TCG1 905 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 FAM200AQ8TCP9 573 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 HAUS7Q99871 368 aa16.04■□□□□ 0.16
TRAF1-201ENST00000373887 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
TRAF1-201ENST00000373887 hCG_1642624A0A1W2PR95 340 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
TRAF1-201ENST00000373887 CALML3P27482 149 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms