RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GJB2P29033 226 aa16.64■□□□□ 0.25
LDB3-204ENST00000372066 ME3Q16798 604 aa16.64■□□□□ 0.25
LDB3-204ENST00000372066 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
LDB3-204ENST00000372066 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
LDB3-204ENST00000372066 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
LDB3-204ENST00000372066 USP17L1Q7RTZ2 530 aa16.64■□□□□ 0.25
LDB3-204ENST00000372066 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
LDB3-204ENST00000372066 MROH5Q6ZUA9 1318 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 DGKZQ13574 1117 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 CAVIN1Q6NZI2 390 aaKnown RBP16.63■□□□□ 0.25
LDB3-204ENST00000372066 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 CDCA5Q96FF9 252 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 GREM2Q9H772 168 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 TPCN1Q9ULQ1 816 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
LDB3-204ENST00000372066 MAST3O60307 1309 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
LDB3-204ENST00000372066 CYP21A2P08686 494 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
LDB3-204ENST00000372066 TTF1Q15361 905 aaPredicted RBP16.62■□□□□ 0.25
LDB3-204ENST00000372066 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 BSDC1Q9NW68 430 aaPredicted RBP16.62■□□□□ 0.25
LDB3-204ENST00000372066 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
LDB3-204ENST00000372066 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
LDB3-204ENST00000372066 VGLL2Q8N8G2 317 aa16.61■□□□□ 0.25
LDB3-204ENST00000372066 SEC62Q99442 399 aaKnown RBP16.61■□□□□ 0.25
LDB3-204ENST00000372066 GMLQ99445 158 aa16.61■□□□□ 0.25
LDB3-204ENST00000372066 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.25
LDB3-204ENST00000372066 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 MLLT1Q03111 559 aaPredicted RBP16.6■□□□□ 0.25
LDB3-204ENST00000372066 ST3GAL1Q11201 340 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
LDB3-204ENST00000372066 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
LDB3-204ENST00000372066 APPBP2Q92624 585 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 RNF186Q9NXI6 227 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 A0A1B0GUL6 1792 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 TRPA1O75762 1119 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 PDE8BO95263 885 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
LDB3-204ENST00000372066 ADORA1P30542 326 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 SAGE1Q9NXZ1 904 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
LDB3-204ENST00000372066 SLC10A3P09131 477 aa16.59■□□□□ 0.25
LDB3-204ENST00000372066 ARID4AP29374 1257 aaPredicted RBP16.59■□□□□ 0.25
LDB3-204ENST00000372066 RGS19P49795 217 aa16.59■□□□□ 0.25
LDB3-204ENST00000372066 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
LDB3-204ENST00000372066 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
LDB3-204ENST00000372066 CSRNP1Q96S65 589 aa16.59■□□□□ 0.25
LDB3-204ENST00000372066 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
LDB3-204ENST00000372066 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
LDB3-204ENST00000372066 SCAF8Q9UPN6 1271 aaKnown RBP16.59■□□□□ 0.25
LDB3-204ENST00000372066 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.24
LDB3-204ENST00000372066 FKBP1BP68106 108 aa16.58■□□□□ 0.24
LDB3-204ENST00000372066 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
LDB3-204ENST00000372066 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
LDB3-204ENST00000372066 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
LDB3-204ENST00000372066 LARP6Q9BRS8 491 aaKnown RBP16.58■□□□□ 0.24
LDB3-204ENST00000372066 MXD3Q9BW11 206 aa16.58■□□□□ 0.24
LDB3-204ENST00000372066 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
LDB3-204ENST00000372066 MYO5AQ9Y4I1 1855 aaKnown RBP16.57■□□□□ 0.24
LDB3-204ENST00000372066 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
LDB3-204ENST00000372066 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
LDB3-204ENST00000372066 LPIN2Q92539 896 aa16.57■□□□□ 0.24
LDB3-204ENST00000372066 ANP32BQ92688 251 aaKnown RBP16.57■□□□□ 0.24
LDB3-204ENST00000372066 COA1Q9GZY4 146 aa16.57■□□□□ 0.24
LDB3-204ENST00000372066 LEMD3Q9Y2U8 911 aa16.57■□□□□ 0.24
LDB3-204ENST00000372066 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
LDB3-204ENST00000372066 M0R2C6 588 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 ZAP70P43403 619 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 UBE2HP62256 183 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 PRAMEF18Q5VWM3 479 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
LDB3-204ENST00000372066 Q6ZUG5 572 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 NECAB1Q8N987 351 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
LDB3-204ENST00000372066 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 SLC5A1P13866 664 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 FGFR2P21802 821 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 IMMTQ16891 758 aaKnown RBP16.55■□□□□ 0.24
LDB3-204ENST00000372066 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 TXNRD3Q86VQ6 643 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
LDB3-204ENST00000372066 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 TMEM63CQ9P1W3 806 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 WDR19Q8NEZ3 1342 aa16.55■□□□□ 0.24
LDB3-204ENST00000372066 E7EWF7 191 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms