RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
PTPN1-201ENST00000371621 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
PTPN1-201ENST00000371621 ZNF513Q8N8E2 541 aaPredicted RBP13.23□□□□□ -0.29
PTPN1-201ENST00000371621 DPF2Q92785 391 aa13.23□□□□□ -0.29
PTPN1-201ENST00000371621 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
PTPN1-201ENST00000371621 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
PTPN1-201ENST00000371621 PCDHA5Q9Y5H7 936 aa13.23□□□□□ -0.29
PTPN1-201ENST00000371621 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 CDKL5O76039 1030 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 ATP11AP98196 1134 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 NNTQ13423 1086 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 CTAGE1Q96RT6 745 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 LSG1Q9H089 658 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 SEPT11Q9NVA2 429 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 KRT83P78385 493 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 FAM133BQ5BKY9 247 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 CCDC63Q8NA47 563 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 ZHX3Q9H4I2 956 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 PLCH2O75038 1416 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 CDC25CP30307 473 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 IRAK1P51617 712 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 IRX1P78414 480 aaPredicted RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 SEPT7Q16181 437 aaKnown RBP13.22□□□□□ -0.29
PTPN1-201ENST00000371621 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 PLEKHG2Q9H7P9 1386 aa13.22□□□□□ -0.29
PTPN1-201ENST00000371621 PNKPQ96T60 521 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 TSC22D3Q99576 134 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 LRRD1A4D1F6 860 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 NLRP6P59044 892 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 GUCY1A3Q02108 690 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 DBN1Q16643 649 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 LRRC23Q53EV4 343 aaPredicted RBP13.21□□□□□ -0.29
PTPN1-201ENST00000371621 GKAP1Q5VSY0 366 aaPredicted RBP13.21□□□□□ -0.29
PTPN1-201ENST00000371621 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
PTPN1-201ENST00000371621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.36e-6■■■■□ 21.5
PTPN1-201ENST00000371621 ABCC2Q92887 1545 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 hCG_2014768A0A024R1R8 64 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.3
PTPN1-201ENST00000371621 AP1G2O75843 785 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 MYZAPP0CAP1 466 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 GCFC2P16383 781 aaKnown RBP13.21□□□□□ -0.3
PTPN1-201ENST00000371621 KRT71Q3SY84 523 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 CCDC38Q502W7 563 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 RASIP1Q5U651 963 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.3
PTPN1-201ENST00000371621 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 HDAC6Q9UBN7 1215 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 ABCF2Q9UG63 623 aa13.21□□□□□ -0.3
PTPN1-201ENST00000371621 PFDN1O60925 122 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■■■■ 27.8
PTPN1-201ENST00000371621 CYP26C1Q6V0L0 522 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
PTPN1-201ENST00000371621 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 SELENOOQ9BVL4 669 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
PTPN1-201ENST00000371621 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 GOLGA8KD6RF30 607 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 IFNAR2P48551 515 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 SEC24CP53992 1094 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
PTPN1-201ENST00000371621 TMTC1Q8IUR5 882 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
PTPN1-201ENST00000371621 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 PDHA1P08559 390 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 RBL2Q08999 1139 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 NOA1Q8NC60 698 aaKnown RBP13.2□□□□□ -0.3
PTPN1-201ENST00000371621 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
PTPN1-201ENST00000371621 MGARPQ8TDB4 240 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
PTPN1-201ENST00000371621 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
PTPN1-201ENST00000371621 MEFVO15553 781 aaPredicted RBP13.19□□□□□ -0.3
PTPN1-201ENST00000371621 METAP2P50579 478 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN1-201ENST00000371621 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 KCNK9Q9NPC2 374 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 CETN3O15182 167 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 SUDS3Q9H7L9 328 aaPredicted RBP13.19□□□□□ -0.3
PTPN1-201ENST00000371621 A6NNZ2 444 aa13.19□□□□□ -0.3
PTPN1-201ENST00000371621 USP5P45974 858 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms