RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
TUBE1-201ENST00000368657 BADQ92934 168 aa13.39□□□□□ -0.27
TUBE1-201ENST00000368657 MPHOSPH8Q99549 860 aa13.39□□□□□ -0.27
TUBE1-201ENST00000368657 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
TUBE1-201ENST00000368657 A0A0G2JLL6 359 aaPredicted RBP13.38□□□□□ -0.27
TUBE1-201ENST00000368657 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
TUBE1-201ENST00000368657 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
TUBE1-201ENST00000368657 PRRT2Q7Z6L0 340 aaPredicted RBP13.38□□□□□ -0.27
TUBE1-201ENST00000368657 CCER1Q8TC90 406 aaPredicted RBP13.38□□□□□ -0.27
TUBE1-201ENST00000368657 TRIB2Q92519 343 aa13.38□□□□□ -0.27
TUBE1-201ENST00000368657 RNPC3Q96LT9 517 aaKnown RBP13.38□□□□□ -0.27
TUBE1-201ENST00000368657 MYD88Q99836 296 aa13.38□□□□□ -0.27
TUBE1-201ENST00000368657 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
TUBE1-201ENST00000368657 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
TUBE1-201ENST00000368657 XRCC5P13010 732 aaKnown RBP13.37□□□□□ -0.27
TUBE1-201ENST00000368657 HDLBPQ00341 1268 aaKnown RBP13.37□□□□□ -0.27
TUBE1-201ENST00000368657 CHRNDQ07001 517 aa13.37□□□□□ -0.27
TUBE1-201ENST00000368657 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
TUBE1-201ENST00000368657 MFSD14BQ5SR56 506 aa13.37□□□□□ -0.27
TUBE1-201ENST00000368657 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
TUBE1-201ENST00000368657 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
TUBE1-201ENST00000368657 RTP1P59025 263 aa13.36□□□□□ -0.27
TUBE1-201ENST00000368657 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-201ENST00000368657 GADL1Q6ZQY3 521 aa13.36□□□□□ -0.27
TUBE1-201ENST00000368657 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
TUBE1-201ENST00000368657 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
TUBE1-201ENST00000368657 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
TUBE1-201ENST00000368657 C11orf16Q9NQ32 467 aa13.36□□□□□ -0.27
TUBE1-201ENST00000368657 JAG2Q9Y219 1238 aa13.36□□□□□ -0.27
TUBE1-201ENST00000368657 LTBP2Q14767 1821 aa13.35□□□□□ -0.27
TUBE1-201ENST00000368657 HOXB7P09629 217 aa13.35□□□□□ -0.27
TUBE1-201ENST00000368657 GCLCP48506 637 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-201ENST00000368657 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-201ENST00000368657 NHLH1Q02575 133 aa13.35□□□□□ -0.27
TUBE1-201ENST00000368657 CACNB2Q08289 660 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-201ENST00000368657 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-201ENST00000368657 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
TUBE1-201ENST00000368657 PNNQ9H307 717 aaKnown RBP13.35□□□□□ -0.27
TUBE1-201ENST00000368657 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
TUBE1-201ENST00000368657 ZHX2Q9Y6X8 837 aa13.35□□□□□ -0.27
TUBE1-201ENST00000368657 RPAP1Q9BWH6 1393 aaPredicted RBP13.34□□□□□ -0.27
TUBE1-201ENST00000368657 PRR33A8MZF0 331 aa13.34□□□□□ -0.27
TUBE1-201ENST00000368657 CYP2B6P20813 491 aa13.34□□□□□ -0.27
TUBE1-201ENST00000368657 CACNB3P54284 484 aa13.34□□□□□ -0.27
TUBE1-201ENST00000368657 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
TUBE1-201ENST00000368657 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
TUBE1-201ENST00000368657 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
TUBE1-201ENST00000368657 MAST2Q6P0Q8 1798 aa13.33□□□□□ -0.28
TUBE1-201ENST00000368657 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
TUBE1-201ENST00000368657 PRDM5Q9NQX1 630 aaPredicted RBP13.33□□□□□ -0.28
TUBE1-201ENST00000368657 AFG3L2Q9Y4W6 797 aa13.33□□□□□ -0.28
TUBE1-201ENST00000368657 SPEF2Q9C093 1822 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 PI4K2BG5E9Z4 385 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 IGFBP4P22692 258 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 ITGA6P23229 1130 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 TDRD7Q8NHU6 1098 aaKnown RBP13.32□□□□□ -0.28
TUBE1-201ENST00000368657 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 TEKT1Q969V4 418 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
TUBE1-201ENST00000368657 AGTPBP1Q9UPW5 1226 aa13.32□□□□□ -0.28
TUBE1-201ENST00000368657 SNAP23O00161 211 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 DNM1LO00429 736 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 MSCO60682 206 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 TAF5LO75529 589 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-201ENST00000368657 CCND3P30281 292 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-201ENST00000368657 SOCS4Q8WXH5 440 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 ZDHHC15Q96MV8 337 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
TUBE1-201ENST00000368657 FAM86C2PA6NEL3 165 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 CHL1O00533 1208 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 ST18O60284 1047 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 PTPRAP18433 802 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 ADGRE1Q14246 886 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 LPAR1Q92633 364 aa13.3□□□□□ -0.28
TUBE1-201ENST00000368657 XIRP2A4UGR9 3374 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 ERC2O15083 957 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 KCNQ1P51787 676 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 SCYL3Q8IZE3 742 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 HERVK_113Q902F9 699 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 TRIM43Q96BQ3 446 aaPredicted RBP13.29□□□□□ -0.28
TUBE1-201ENST00000368657 PDLIM7Q9NR12 457 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
TUBE1-201ENST00000368657 DDX58O95786 925 aaKnown RBP13.28□□□□□ -0.28
TUBE1-201ENST00000368657 RIPK4P57078 832 aa13.28□□□□□ -0.28
TUBE1-201ENST00000368657 TFF2Q03403 129 aa13.28□□□□□ -0.28
TUBE1-201ENST00000368657 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
TUBE1-201ENST00000368657 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
TUBE1-201ENST00000368657 APOBEC3HQ6NTF7 200 aaKnown RBP13.28□□□□□ -0.28
TUBE1-201ENST00000368657 ARRDC4Q8NCT1 418 aa13.28□□□□□ -0.28
TUBE1-201ENST00000368657 MYH3P11055 1940 aa13.28□□□□□ -0.28
TUBE1-201ENST00000368657 TLL1O43897 1013 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 CSF1RP07333 972 aa13.27□□□□□ -0.29
TUBE1-201ENST00000368657 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms