RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 PLA2G12BQ9BX93 195 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 BIN2Q9UBW5 565 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 ZNF70Q9UC06 446 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 SPDYE5A6NIY4 337 aa13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 UBXN2AP68543 259 aa13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 C17orf99Q6UX52 265 aa13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 Q7L0L9 218 aa13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 MPHOSPH8Q99549 860 aa13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-202ENST00000366216 RAB11FIP3O75154 756 aa13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 SNAPC2Q13487 334 aa13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 ERO1BQ86YB8 467 aa13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 SNCAIPQ9Y6H5 919 aa13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 PRUNE2Q8WUY3 3088 aa13.75□□□□□ -0.21
CSNK1E-202ENST00000366216 ADGRA2Q96PE1 1338 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 TCP10L2B9ZVM9 353 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 IRF6O14896 467 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 SGPL1O95470 568 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 BMP8BP34820 402 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 ZNF804AQ7Z570 1209 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 KAZALD1Q96I82 304 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 SUCLG2Q96I99 432 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 MTMR10Q9NXD2 777 aa13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-202ENST00000366216 TNNI2P48788 182 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 DNAH12Q6ZR08 3092 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 DOCK2Q92608 1830 aa13.73□□□□□ -0.21
CSNK1E-202ENST00000366216 FAM205AQ6ZU69 1335 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 CACNB3P54284 484 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 FOXO4P98177 505 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 PPIL2Q13356 520 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 EPHA10Q5JZY3 1008 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 PLEKHM2Q8IWE5 1019 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 ZKSCAN4Q969J2 545 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 ZNF594Q96JF6 807 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 WRNIP1Q96S55 665 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 GDF15Q99988 308 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
CSNK1E-202ENST00000366216 SURF6O75683 361 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 TFRCP02786 760 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 CAPN2P17655 700 aa13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 FCGRTP55899 365 aa13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 PRKCZQ05513 592 aa13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 MOGSQ13724 837 aa13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 LRIT3Q3SXY7 679 aa13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 OSBPL3Q9H4L5 887 aa13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-202ENST00000366216 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 PDHXO00330 501 aa13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 BCAMP50895 628 aa13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 MFSD14BQ5SR56 506 aa13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 ANKRD23Q86SG2 305 aa13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 TDRD7Q8NHU6 1098 aaKnown RBP13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 KIF1BPQ96EK5 621 aa13.7□□□□□ -0.22
CSNK1E-202ENST00000366216 TTC28Q96AY4 2481 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 ADCY3O60266 1144 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 GYG1P46976 350 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 ERC1Q8IUD2 1116 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 C7orf61Q8IZ16 206 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 PAWRQ96IZ0 340 aaKnown RBP13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 GABRQQ9UN88 632 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
CSNK1E-202ENST00000366216 SALL3Q9BXA9 1300 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 DOCK1Q14185 1865 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 APBB1O00213 710 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 INHAP05111 366 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 CRKP46108 304 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 PPATQ06203 517 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 TTC22Q5TAA0 569 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 TDHQ8IZJ6 230 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 HOOK2Q96ED9 719 aa13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 FAM84BQ96KN1 310 aaPredicted RBP13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 PAK6Q9NQU5 681 aaPredicted RBP13.68□□□□□ -0.22
CSNK1E-202ENST00000366216 ATAD5Q96QE3 1844 aa13.67□□□□□ -0.22
CSNK1E-202ENST00000366216 ELNP15502 786 aa13.67□□□□□ -0.22
CSNK1E-202ENST00000366216 INPP5BP32019 993 aa13.67□□□□□ -0.22
CSNK1E-202ENST00000366216 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
CSNK1E-202ENST00000366216 PARK7Q99497 189 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms