RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 GOLIM4O00461 696 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 PLCG2P16885 1265 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 CTCFP49711 727 aaPredicted RBP20.56■□□□□ 0.88
CKLF-204ENST00000362093 MAP3K10Q02779 954 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 PICALMQ13492 652 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 GCC1Q96CN9 775 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 WNK4Q96J92 1243 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 ZNF341Q9BYN7 854 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 ECHDC1Q9NTX5 307 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 PAG1Q9NWQ8 432 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 ZNF112Q9UJU3 913 aa20.56■□□□□ 0.88
CKLF-204ENST00000362093 CA12O43570 354 aa20.55■□□□□ 0.88
CKLF-204ENST00000362093 TM4SF4P48230 202 aa20.55■□□□□ 0.88
CKLF-204ENST00000362093 MKRN3Q13064 507 aaKnown RBP20.55■□□□□ 0.88
CKLF-204ENST00000362093 VGLL4Q14135 290 aa20.55■□□□□ 0.88
CKLF-204ENST00000362093 TEX11Q8IYF3 940 aa20.55■□□□□ 0.88
CKLF-204ENST00000362093 ZBTB48P10074 688 aaPredicted RBP20.54■□□□□ 0.88
CKLF-204ENST00000362093 HSPA8P11142 646 aaKnown RBP20.54■□□□□ 0.88
CKLF-204ENST00000362093 GJA5P36382 358 aa20.54■□□□□ 0.88
CKLF-204ENST00000362093 DYNLL1P63167 89 aaKnown RBP20.54■□□□□ 0.88
CKLF-204ENST00000362093 ZSCAN29Q8IWY8 852 aaPredicted RBP20.54■□□□□ 0.88
CKLF-204ENST00000362093 WRNIP1Q96S55 665 aa20.54■□□□□ 0.88
CKLF-204ENST00000362093 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.54■□□□□ 0.88
CKLF-204ENST00000362093 CSADQ9Y600 493 aa20.54■□□□□ 0.88
CKLF-204ENST00000362093 ATRNL1Q5VV63 1379 aa20.54■□□□□ 0.88
CKLF-204ENST00000362093 MAST2Q6P0Q8 1798 aa20.54■□□□□ 0.88
CKLF-204ENST00000362093 PDE6AP16499 860 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 SLC9C2Q5TAH2 1124 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 CERS3Q8IU89 383 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 TGFBRAP1Q8WUH2 860 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 OSBPL5Q9H0X9 879 aaPredicted RBP20.53■□□□□ 0.88
CKLF-204ENST00000362093 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
CKLF-204ENST00000362093 ELP3Q9H9T3 547 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 DOCK2Q92608 1830 aa20.53■□□□□ 0.88
CKLF-204ENST00000362093 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 IGHDP01880 384 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 LBX1P52954 281 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 MIGA1Q8NAN2 632 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 ZKSCAN4Q969J2 545 aaPredicted RBP20.52■□□□□ 0.88
CKLF-204ENST00000362093 OPTNQ96CV9 577 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 PRDM10Q9NQV6 1147 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 SNCAIPQ9Y6H5 919 aa20.52■□□□□ 0.88
CKLF-204ENST00000362093 MANSC4A6NHS7 340 aaPredicted RBP20.51■□□□□ 0.87
CKLF-204ENST00000362093 PHF20L1A8MW92 1017 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 TBC1D12O60347 775 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 INPP5BP32019 993 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 OTUD7AQ8TE49 926 aaPredicted RBP20.51■□□□□ 0.87
CKLF-204ENST00000362093 CNKSR2Q8WXI2 1034 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 GPATCH3Q96I76 525 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 RIOK1Q9BRS2 568 aaKnown RBP20.51■□□□□ 0.87
CKLF-204ENST00000362093 SAGE1Q9NXZ1 904 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 TTC41PQ6P2S7 1318 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 ZNF532Q9HCE3 1301 aa20.51■□□□□ 0.87
CKLF-204ENST00000362093 COL2A1P02458 1487 aaPredicted RBP20.5■□□□□ 0.87
CKLF-204ENST00000362093 SLURP2P0DP57 97 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 INHBEP58166 350 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 SREBF2Q12772 1141 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 TSHZ3Q63HK5 1081 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 TNS4Q8IZW8 715 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 TSKSQ9UJT2 592 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 OTOFQ9HC10 1997 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
CKLF-204ENST00000362093 SPDYE5A6NIY4 337 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 TRPA1O75762 1119 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 ADD2P35612 726 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 NOL9Q5SY16 702 aaKnown RBP20.49■□□□□ 0.87
CKLF-204ENST00000362093 ERO1BQ86YB8 467 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 MAPKAPK5Q8IW41 473 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 MS4A4AQ96JQ5 239 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
CKLF-204ENST00000362093 FLT1P17948 1338 aa20.49■□□□□ 0.87
CKLF-204ENST00000362093 MAGEB6P1A0A0J9YX57 407 aa20.48■□□□□ 0.87
CKLF-204ENST00000362093 TESPA1A2RU30 521 aaPredicted RBP20.48■□□□□ 0.87
CKLF-204ENST00000362093 IRX6P78412 446 aaPredicted RBP20.48■□□□□ 0.87
CKLF-204ENST00000362093 SLFNL1Q499Z3 407 aa20.48■□□□□ 0.87
CKLF-204ENST00000362093 PI4K2BQ8TCG2 481 aa20.48■□□□□ 0.87
CKLF-204ENST00000362093 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.87
CKLF-204ENST00000362093 PCDH10Q9P2E7 1040 aa20.48■□□□□ 0.87
CKLF-204ENST00000362093 PI4KBQ9UBF8 816 aa20.48■□□□□ 0.87
CKLF-204ENST00000362093 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
CKLF-204ENST00000362093 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
CKLF-204ENST00000362093 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
CKLF-204ENST00000362093 ERC2O15083 957 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 GLRX3O76003 335 aaKnown RBP20.46■□□□□ 0.87
CKLF-204ENST00000362093 MX1P20591 662 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 USP5P45974 858 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 PPATQ06203 517 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 IFNL1Q8IU54 200 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 FOXP4Q8IVH2 680 aaPredicted RBP20.46■□□□□ 0.87
CKLF-204ENST00000362093 KBTBD3Q8NAB2 608 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 OTUD5Q96G74 571 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 PTPN18Q99952 460 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.46■□□□□ 0.87
CKLF-204ENST00000362093 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
CKLF-204ENST00000362093 IRF6O14896 467 aa20.45■□□□□ 0.86
CKLF-204ENST00000362093 CTNND1O60716 968 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms