RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DZIP1Q86YF9 867 aaKnown RBP15.75■□□□□ 0.11
COL6A1-201ENST00000361866 LINC00301Q8NCQ3 95 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 ST7Q9NRC1 585 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 DDX41Q9UJV9 622 aaKnown RBP15.75■□□□□ 0.11
COL6A1-201ENST00000361866 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-201ENST00000361866 PSMA7O14818 248 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 KIF5AQ12840 1032 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
COL6A1-201ENST00000361866 TMTC2Q8N394 836 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 MLKLQ8NB16 471 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 CCDC42Q96M95 316 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 ATP7BP35670 1465 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 KRT86O43790 486 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 ASIC1P78348 528 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 GOLPH3LQ9H4A5 285 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 COPRSQ9NQ92 184 aa15.75■□□□□ 0.11
COL6A1-201ENST00000361866 E9PCH4 1651 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 IQUBQ8NA54 791 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 NAPGQ99747 312 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-201ENST00000361866 PLEKHA4Q9H4M7 779 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 TCEAL9Q9UHQ7 104 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 ITGA6P23229 1130 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 ATRIPQ8WXE1 791 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 ZCCHC17Q9NP64 241 aaKnown RBP15.74■□□□□ 0.11
COL6A1-201ENST00000361866 TET3O43151 1660 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-201ENST00000361866 ADORA1P30542 326 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 TERF2Q15554 542 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 CCDC40Q4G0X9 1142 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 SPTY2D1Q68D10 685 aaPredicted RBP15.74■□□□□ 0.11
COL6A1-201ENST00000361866 NBPF11Q86T75 865 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 CARMIL3Q8ND23 1372 aa15.74■□□□□ 0.11
COL6A1-201ENST00000361866 RNASE9P60153 205 aaKnown RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 IRX3P78415 501 aaPredicted RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 TCERG1LQ5VWI1 586 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 PLCD4Q9BRC7 762 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 ZNF532Q9HCE3 1301 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 SYNRGQ9UMZ2 1314 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 ERLIN2O94905 339 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 KAT14Q9H8E8 782 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 KRT2P35908 639 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 PRPF4BQ13523 1007 aaKnown RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 PLA2G4DQ86XP0 818 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 GPR161Q8N6U8 529 aaKnown RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 EFCAB6Q5THR3 1501 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 EFCAB8A8MWE9 144 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 ZBTB22O15209 634 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 AP5Z1O43299 807 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
COL6A1-201ENST00000361866 IFT81Q8WYA0 676 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 C19orf44Q9H6X5 657 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
COL6A1-201ENST00000361866 MAST3O60307 1309 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 EBAG9O00559 213 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 CKAP4Q07065 602 aaKnown RBP15.72■□□□□ 0.11
COL6A1-201ENST00000361866 IFFO1Q0D2I5 559 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 RMND1Q9NWS8 449 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 PIK3AP1Q6ZUJ8 805 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 SMYD4Q8IYR2 804 aaPredicted RBP15.72■□□□□ 0.11
COL6A1-201ENST00000361866 OSBP2Q969R2 916 aa15.72■□□□□ 0.11
COL6A1-201ENST00000361866 CDC25BP30305 580 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 TRMT1LQ7Z2T5 733 aaKnown RBP15.71■□□□□ 0.11
COL6A1-201ENST00000361866 EHBP1Q8NDI1 1231 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 PDE11AQ9HCR9 933 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 MYO6Q9UM54 1294 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.11
COL6A1-201ENST00000361866 A0A1W2PQ27 194 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 A0A1W2PQ64 194 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 A0A1W2PQD8 194 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 HSF2BPO75031 334 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 PNMA6AP0CW24 399 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-201ENST00000361866 KIF5BP33176 963 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 TBC1D8BQ0IIM8 1120 aa15.71■□□□□ 0.11
COL6A1-201ENST00000361866 TTC31Q49AM3 519 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-201ENST00000361866 USP6P35125 1406 aa15.71■□□□□ 0.1
COL6A1-201ENST00000361866 TACC1O75410 805 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 BMP15O95972 392 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 KRT83P78385 493 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 SLC39A14Q15043 492 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 CALML4Q96GE6 196 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 ABCC3O15438 1527 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 DEXIO95424 95 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 GLI2P10070 1586 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 SYCP1Q15431 976 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
COL6A1-201ENST00000361866 ANKRD65E5RJM6 399 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms