RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
LINC01560-201ENST00000357412 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
LINC01560-201ENST00000357412 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 GNRH1P01148 92 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 PTPRAP18433 802 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 MECOMQ03112 1051 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 KIF22Q14807 665 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 PI16Q6UXB8 463 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 NBPF11Q86T75 865 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 SCYL3Q8IZE3 742 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
LINC01560-201ENST00000357412 MROH7-TTC4A0A0A0MT08 1334 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 BRCA2P51587 3418 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 PICALMQ13492 652 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
LINC01560-201ENST00000357412 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
LINC01560-201ENST00000357412 TRIM47Q96LD4 638 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 TMEM106CQ9BVX2 250 aa12.63□□□□□ -0.39
LINC01560-201ENST00000357412 TNRC18O15417 2968 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 CYP2C8P10632 490 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 BCRP11274 1271 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 PSMC4P43686 418 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 PRMT2P55345 433 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
LINC01560-201ENST00000357412 PICK1Q9NRD5 415 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
LINC01560-201ENST00000357412 TBC1D12O60347 775 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
LINC01560-201ENST00000357412 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
LINC01560-201ENST00000357412 OSBPP22059 807 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 MCAMP43121 646 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 POLA2Q14181 598 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 SLC4A8Q2Y0W8 1093 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
LINC01560-201ENST00000357412 FASTKD5Q7L8L6 764 aaKnown RBP12.61□□□□□ -0.39
LINC01560-201ENST00000357412 CENPFP49454 3210 aa12.6□□□□□ -0.39
LINC01560-201ENST00000357412 FMNL1O95466 1100 aaPredicted RBP12.6□□□□□ -0.39
LINC01560-201ENST00000357412 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
LINC01560-201ENST00000357412 HOXD10P28358 340 aa12.6□□□□□ -0.39
LINC01560-201ENST00000357412 GSTO1P78417 241 aa12.6□□□□□ -0.39
LINC01560-201ENST00000357412 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
LINC01560-201ENST00000357412 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
LINC01560-201ENST00000357412 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
LINC01560-201ENST00000357412 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 LDHCP07864 332 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 ATP8B2P98198 1209 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 MTFR1Q15390 333 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 TNNI3KQ59H18 835 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 DBNDD2Q9BQY9 259 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 OSBPL5Q9H0X9 879 aaPredicted RBP12.59□□□□□ -0.39
LINC01560-201ENST00000357412 GPR108Q9NPR9 543 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 SLC45A1Q9Y2W3 748 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 FPGT-TNNI3KV9GXZ4 949 aa12.59□□□□□ -0.39
LINC01560-201ENST00000357412 TRIM75PA6NK02 468 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
LINC01560-201ENST00000357412 FCGRTP55899 365 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 PRKCZQ05513 592 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
LINC01560-201ENST00000357412 GADL1Q6ZQY3 521 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 C1orf115Q9H7X2 142 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC01560-201ENST00000357412 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 LRP2BPQ9P2M1 347 aa12.58□□□□□ -0.4
LINC01560-201ENST00000357412 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
LINC01560-201ENST00000357412 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
LINC01560-201ENST00000357412 RLBP1P12271 317 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 GRK4P32298 578 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
LINC01560-201ENST00000357412 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 ZNF512BQ96KM6 892 aaPredicted RBP12.57□□□□□ -0.4
LINC01560-201ENST00000357412 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
LINC01560-201ENST00000357412 MYPNQ86TC9 1320 aa12.57□□□□□ -0.4
LINC01560-201ENST00000357412 KIAA0100Q14667 2235 aaKnown RBP12.57□□□□□ -0.4
LINC01560-201ENST00000357412 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
LINC01560-201ENST00000357412 PPP4CP60510 307 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01560-201ENST00000357412 SPP2Q13103 211 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms