RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 FAM135AQ9P2D6 1515 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 NUP160Q12769 1436 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 CASQ2O14958 399 aaPredicted RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 RABEP2Q9H5N1 569 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 DAPK3O43293 454 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 ITIH3Q06033 890 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 VWA3BQ502W6 1294 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 B4GALNT4Q76KP1 1039 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 SLC8A3P57103 927 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 ANKRD36BQ8N2N9 1353 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 NYXQ9GZU5 481 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 MAPK8IP1Q9UQF2 711 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
RXRA-201ENST00000356384 TFCP2L1Q9NZI6 479 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 IRS4O14654 1257 aaPredicted RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 SATB1Q01826 763 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 ASIC2Q16515 512 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 CWF19L2Q2TBE0 894 aaKnown RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 TBC1D31Q96DN5 1066 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 SWAP70Q9UH65 585 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 SAP30BPQ9UHR5 308 aaKnown RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 PLCD1P51178 756 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 LMNTD2Q8IXW0 634 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 ARHGEF2Q92974 986 aaKnown RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 NAP1L4Q99733 375 aaKnown RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 NOS1P29475 1434 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 RFC1P35251 1148 aaPredicted RBP17.94■□□□□ 0.46
RXRA-201ENST00000356384 PPP2R5CQ13362 524 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 LIN9Q5TKA1 542 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 CEP128Q6ZU80 1094 aa17.94■□□□□ 0.46
RXRA-201ENST00000356384 TARBP1Q13395 1621 aaKnown RBP17.93■□□□□ 0.46
RXRA-201ENST00000356384 IRX3P78415 501 aaPredicted RBP17.93■□□□□ 0.46
RXRA-201ENST00000356384 ERO1AQ96HE7 468 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 A0A1B0GUL7 405 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 ERCC3P19447 782 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 FCHSD1Q86WN1 690 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 MCUR1Q96AQ8 359 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 NUF2Q9BZD4 464 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 SCAF11Q99590 1463 aaKnown RBP17.93■□□□□ 0.46
RXRA-201ENST00000356384 TMCO4Q5TGY1 634 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 CYP26C1Q6V0L0 522 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 TRPC3Q13507 836 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 BUB1BO60566 1050 aaPredicted RBP17.93■□□□□ 0.46
RXRA-201ENST00000356384 MBD4O95243 580 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 SMTNP53814 917 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 UBL4BQ8N7F7 174 aa17.93■□□□□ 0.46
RXRA-201ENST00000356384 A0A1B0GUA9 196 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 GIPC1O14908 333 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 TOM1O60784 492 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 CPA1P15085 419 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 DDB1Q16531 1140 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 MSH6P52701 1360 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 GOLGA6CA6NDK9 693 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 GOLGA6DP0CG33 693 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 GBP1P32455 592 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 GOLGA6AQ9NYA3 693 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 CNNM4Q6P4Q7 775 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 FAM114A2Q9NRY5 505 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 TRIM14Q14142 442 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 PIK3AP1Q6ZUJ8 805 aa17.92■□□□□ 0.46
RXRA-201ENST00000356384 PPP1R2P41236 205 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 VSIG1Q86XK7 387 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 GPIHBP1Q8IV16 184 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 LRRC59Q96AG4 307 aaKnown RBP17.91■□□□□ 0.46
RXRA-201ENST00000356384 TTF2Q9UNY4 1162 aaKnown RBP17.91■□□□□ 0.46
RXRA-201ENST00000356384 CEP85Q6P2H3 762 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 JDP2Q8WYK2 163 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 ASIC3Q9UHC3 531 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 AFG3L2Q9Y4W6 797 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 CCNT1O60563 726 aaKnown RBP17.91■□□□□ 0.46
RXRA-201ENST00000356384 STK10O94804 968 aaKnown RBP17.91■□□□□ 0.46
RXRA-201ENST00000356384 SMC5Q8IY18 1101 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 CALUO43852 315 aaPredicted RBP17.91■□□□□ 0.46
RXRA-201ENST00000356384 GABPAQ06546 454 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 LONRF3Q496Y0 759 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 CSGALNACT2Q8N6G5 542 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 USTQ9Y2C2 406 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 INPP5BP32019 993 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 SF3A3Q12874 501 aaKnown RBP eCLIP17.91■□□□□ 0.461e-6■■■■■ 38.4
RXRA-201ENST00000356384 C8orf34Q49A92 452 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 HHATQ5VTY9 493 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 IFT20Q8IY31 132 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 NOX5Q96PH1 765 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 CLSTN2Q9H4D0 955 aa17.91■□□□□ 0.46
RXRA-201ENST00000356384 ARID4AP29374 1257 aaPredicted RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 CCDC62Q6P9F0 684 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 INTS4Q96HW7 963 aaKnown RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 CPSF2Q9P2I0 782 aaKnown RBP17.9■□□□□ 0.46
RXRA-201ENST00000356384 CHMLP26374 656 aa17.9■□□□□ 0.46
RXRA-201ENST00000356384 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms