RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 BTDP43251 543 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 MECOMQ03112 1051 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 ZFPM1Q8IX07 1006 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CAPN3-204ENST00000356316 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
CAPN3-204ENST00000356316 HTTP42858 3142 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 GAKO14976 1311 aa13.13□□□□□ -0.31
CAPN3-204ENST00000356316 PDHXO00330 501 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 PICALMQ13492 652 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 NOL9Q5SY16 702 aaKnown RBP13.12□□□□□ -0.31
CAPN3-204ENST00000356316 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
CAPN3-204ENST00000356316 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 CXCL11O14625 94 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-204ENST00000356316 HOXD10P28358 340 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-204ENST00000356316 CCDC158Q5M9N0 1113 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
CAPN3-204ENST00000356316 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
CAPN3-204ENST00000356316 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
CAPN3-204ENST00000356316 CTNND1O60716 968 aaKnown RBP13.1□□□□□ -0.31
CAPN3-204ENST00000356316 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-204ENST00000356316 PRMT2P55345 433 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
CAPN3-204ENST00000356316 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 DOCK2Q92608 1830 aa13.1□□□□□ -0.31
CAPN3-204ENST00000356316 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-204ENST00000356316 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
CAPN3-204ENST00000356316 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-204ENST00000356316 BAG3O95817 575 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-204ENST00000356316 PSMC4P43686 418 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
CAPN3-204ENST00000356316 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
CAPN3-204ENST00000356316 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
CAPN3-204ENST00000356316 PTPRAP18433 802 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-204ENST00000356316 CAP1Q01518 475 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
CAPN3-204ENST00000356316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
CAPN3-204ENST00000356316 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
CAPN3-204ENST00000356316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-204ENST00000356316 TBC1D12O60347 775 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 SLC34A2O95436 690 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-204ENST00000356316 MCAMP43121 646 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 TNNI3KQ59H18 835 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-204ENST00000356316 TEX11Q8IYF3 940 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 RAET1EQ8TD07 263 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 FPGT-TNNI3KV9GXZ4 949 aa13.07□□□□□ -0.32
CAPN3-204ENST00000356316 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-204ENST00000356316 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-204ENST00000356316 CYP2C8P10632 490 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 PLCG2P16885 1265 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 RHBDL3P58872 404 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 MOGSQ13724 837 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-204ENST00000356316 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 C1orf115Q9H7X2 142 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-204ENST00000356316 SRRDQ9UH36 339 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
CAPN3-204ENST00000356316 PDE4DIPQ5VU43 2346 aa13.06□□□□□ -0.32
CAPN3-204ENST00000356316 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
CAPN3-204ENST00000356316 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
CAPN3-204ENST00000356316 MS4A1P11836 297 aa13.05□□□□□ -0.32
CAPN3-204ENST00000356316 FCGRTP55899 365 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms