RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 IRAK4Q9NWZ3 460 aa12.46□□□□□ -0.42
SND1-201ENST00000354725 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.42
SND1-201ENST00000354725 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.42
SND1-201ENST00000354725 GPS2Q13227 327 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 PRPF40BQ6NWY9 871 aaKnown RBP12.45□□□□□ -0.42
SND1-201ENST00000354725 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 EAF2Q96CJ1 260 aaPredicted RBP12.45□□□□□ -0.42
SND1-201ENST00000354725 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
SND1-201ENST00000354725 ECM29Q5VYK3 1845 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 LRRC27Q9C0I9 530 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 MAP3K2Q9Y2U5 619 aa12.45□□□□□ -0.42
SND1-201ENST00000354725 WDHD1O75717 1129 aaPredicted RBP12.44□□□□□ -0.42
SND1-201ENST00000354725 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 ST5P78524 1137 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 NAIF1Q69YI7 327 aaPredicted RBP12.44□□□□□ -0.42
SND1-201ENST00000354725 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 PLA2G4DQ86XP0 818 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 SDR16C5Q8N3Y7 309 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 SUCLG2Q96I99 432 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 FAXDC2Q96IV6 333 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 DIS3Q9Y2L1 958 aaKnown RBP12.44□□□□□ -0.42
SND1-201ENST00000354725 MYH7P12883 1935 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 A0A0D9SFI3 127 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
SND1-201ENST00000354725 PTGER2P43116 358 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 TPM4P67936 248 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 NMIQ13287 307 aaPredicted RBP12.44□□□□□ -0.42
SND1-201ENST00000354725 JAKMIP3Q5VZ66 844 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 TAF6LQ9Y6J9 622 aa12.44□□□□□ -0.42
SND1-201ENST00000354725 STARD3NLO95772 234 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 C16orf87Q6PH81 154 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 IQUBQ8NA54 791 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 GRM8O00222 908 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
SND1-201ENST00000354725 IRX1P78414 480 aaPredicted RBP12.43□□□□□ -0.42
SND1-201ENST00000354725 FAM200AQ8TCP9 573 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
SND1-201ENST00000354725 UTRNP46939 3433 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 FIBPO43427 364 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 PLA2G4AP47712 749 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■■□ 24
SND1-201ENST00000354725 PA2G4Q9UQ80 394 aaKnown RBP12.43□□□□□ -0.42
SND1-201ENST00000354725 FHOD1Q9Y613 1164 aa12.43□□□□□ -0.42
SND1-201ENST00000354725 TATDN2Q93075 761 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
SND1-201ENST00000354725 SMAPO00193 183 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 GNPATO15228 680 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 POLR3GO15318 223 aaPredicted RBP12.42□□□□□ -0.42
SND1-201ENST00000354725 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
SND1-201ENST00000354725 SPATA32Q96LK8 384 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
SND1-201ENST00000354725 ZNF609O15014 1411 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.42□□□□□ -0.42
SND1-201ENST00000354725 TAF5LO75529 589 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 GYS1P13807 737 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 TM4SF1P30408 202 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 RABL6Q3YEC7 729 aaPredicted RBP12.42□□□□□ -0.42
SND1-201ENST00000354725 AGXT2Q9BYV1 514 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
SND1-201ENST00000354725 EIF3CLB5ME19 914 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 ANXA1P04083 346 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 R3HDM1Q15032 1099 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 EIF3CQ99613 913 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 SMC2O95347 1197 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 TPM1P09493 284 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 PDCP20941 246 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 PSMA5P28066 241 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 ADD1P35611 737 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 PIP4K2AP48426 406 aaPredicted RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 SMARCC2Q8TAQ2 1214 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
SND1-201ENST00000354725 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 SALL1Q9NSC2 1324 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 CPP00450 1065 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 CDC25BP30305 580 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 RESTQ13127 1097 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 AACSQ86V21 672 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 MIEF2Q96C03 454 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
SND1-201ENST00000354725 KRT85P78386 507 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms