RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 IQCB1Q15051 598 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 CCDC122Q5T0U0 273 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 SRLQ86TD4 932 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
SPPL3-201ENST00000353487 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 CDK5RAP3Q96JB5 506 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 SEPT11Q9NVA2 429 aaKnown RBP16.18■□□□□ 0.18
SPPL3-201ENST00000353487 RCOR1Q9UKL0 485 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 STK38LQ9Y2H1 464 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 KIAA0232Q92628 1395 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 EXOC4Q96A65 974 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 TAF6LQ9Y6J9 622 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 ENC1O14682 589 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 LRRC59Q96AG4 307 aaKnown RBP16.18■□□□□ 0.18
SPPL3-201ENST00000353487 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
SPPL3-201ENST00000353487 ZBTB43O43298 467 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 ARHGAP25P42331 645 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 FBXW10Q5XX13 1052 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
SPPL3-201ENST00000353487 PCDHA5Q9Y5H7 936 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 IQGAP1P46940 1657 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 ENO4A6NNW6 628 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 TAF5LO75529 589 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 SARM1Q6SZW1 724 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 SEPT14Q6ZU15 432 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 NAPBQ9H115 298 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 ZHX3Q9H4I2 956 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 TSPOAP1O95153 1857 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 ARAP3Q8WWN8 1544 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 RAD21O60216 631 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 GUCY2CP25092 1073 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 LTKP29376 864 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 TOB2Q14106 344 aaPredicted RBP16.17■□□□□ 0.18
SPPL3-201ENST00000353487 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 WDR24Q96S15 920 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 SMIM24O75264 130 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 SETSIPP0DME0 302 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 NSUN7Q8NE18 718 aaKnown RBP16.17■□□□□ 0.18
SPPL3-201ENST00000353487 LLPHQ9BRT6 129 aaKnown RBP16.17■□□□□ 0.18
SPPL3-201ENST00000353487 YIPF3Q9GZM5 350 aa16.17■□□□□ 0.18
SPPL3-201ENST00000353487 USO1O60763 962 aaKnown RBP16.16■□□□□ 0.18
SPPL3-201ENST00000353487 VIMP08670 466 aaKnown RBP16.16■□□□□ 0.18
SPPL3-201ENST00000353487 UBXN1Q04323 297 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 PSMD2Q13200 908 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 KSR1Q8IVT5 923 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
SPPL3-201ENST00000353487 EEF2KMTQ96G04 330 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 CEP131Q9UPN4 1083 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 SLC35F6Q8N357 371 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 G3BP2Q9UN86 482 aaKnown RBP16.16■□□□□ 0.18
SPPL3-201ENST00000353487 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 PHLPP2Q6ZVD8 1323 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 AKR1B10O60218 316 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 ANKRD13DQ6ZTN6 518 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 ANKS4BQ8N8V4 417 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
SPPL3-201ENST00000353487 FHOD1Q9Y613 1164 aa16.16■□□□□ 0.18
SPPL3-201ENST00000353487 LAMC1P11047 1609 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 KRT9P35527 623 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 MTIF2P46199 727 aaKnown RBP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 ATL3Q6DD88 541 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 TEX11Q8IYF3 940 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 ZKSCAN3Q9BRR0 538 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 USH1CQ9Y6N9 552 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 E7EWF7 191 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 MRPS25P82663 173 aaKnown RBP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 WHAMMP3Q1A5X7 153 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 METTL24Q5JXM2 366 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 SRGAP1Q7Z6B7 1085 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 KRI1Q8N9T8 703 aaKnown RBP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 WASF1Q92558 559 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 PPP1R12BO60237 982 aaPredicted RBP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 CHGBP05060 677 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 TOGARAM2Q6ZUX3 1019 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 NYAP1Q6ZVC0 841 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 CAPS2Q9BXY5 557 aa16.15■□□□□ 0.18
SPPL3-201ENST00000353487 GEMIN8Q9NWZ8 242 aaKnown RBP16.15■□□□□ 0.18
SPPL3-201ENST00000353487 CCDC151A5D8V7 595 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 DPF2Q92785 391 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 PLIN2Q99541 437 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 LUC7LQ9NQ29 371 aaKnown RBP16.14■□□□□ 0.17
SPPL3-201ENST00000353487 RNF40O75150 1001 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 ERCC3P19447 782 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 MXRA7P84157 204 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 VPS37DQ86XT2 251 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
SPPL3-201ENST00000353487 TAB2Q9NYJ8 693 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms