RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 ADGRG1Q9Y653 693 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 FAM196BA6NMK8 535 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 MCM2P49736 904 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 MFSD10Q14728 455 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 C6orf118Q5T5N4 469 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 INTS3Q68E01 1043 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 CHCHD4Q8N4Q1 142 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 PARD3BQ8TEW8 1205 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 SLC26A6Q9BXS9 759 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 NIFKQ9BYG3 293 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 ANTXR1Q9H6X2 564 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 CATSPERZQ9NTU4 200 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 MRGBPQ9NV56 204 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 NCDNQ9UBB6 729 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ZNF500O60304 480 aaPredicted RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 LMNB2Q03252 620 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 CCDC174Q6PII3 467 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 JPH4Q96JJ6 628 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 TCHPQ9BT92 498 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ADAM33Q9BZ11 813 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ARHGEF10LQ9HCE6 1279 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ZSCAN32Q9NX65 697 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 TPX2Q9ULW0 747 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 DNM3Q9UQ16 869 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 NOC2LQ9Y3T9 749 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 RPLP2P05387 115 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 GNA15P30679 374 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 PSMA6P60900 246 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 ARSIQ5FYB1 569 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 TEX35Q5T0J7 233 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 MYO1HQ8N1T3 1032 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ADCY4Q8NFM4 1077 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 CCDC85AQ96PX6 553 aaPredicted RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 SEPT11Q9NVA2 429 aaKnown RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 KLF15Q9UIH9 416 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ZHX1Q9UKY1 873 aaPredicted RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 EIF2AK4Q9P2K8 1649 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 IBTKQ9P2D0 1353 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 RAD54L2Q9Y4B4 1467 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 LOC102724159A0A0B4J2E5 919 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 TBCAO75347 108 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 EDN3P14138 238 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 PWP2Q15269 919 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 EFCAB2Q5VUJ9 269 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 SAMD7Q7Z3H4 446 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 SH2D3CQ8N5H7 860 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 XAGE3Q8WTP9 111 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 TSR3Q9UJK0 312 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 V9GY48 417 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 DNMT1P26358 1616 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 CD53P19397 219 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 C10orf62Q5T681 223 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 TRIM68Q6AZZ1 485 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 MCUQ8NE86 351 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 RASAL2Q9UJF2 1139 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 SMTNL1A8MU46 457 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 ALG1L2C9J202 215 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 MYBP10242 640 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 UAP1L1Q3KQV9 507 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 ZNF280DQ6N043 979 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 TXLNBQ8N3L3 684 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 CRACR2BQ8N4Y2 399 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 WDR66Q8TBY9 1149 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 SPSB2Q99619 263 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 MAK16Q9BXY0 300 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 TGIF2Q9GZN2 237 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 RBM28Q9NW13 759 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 ITGB1BP2Q9UKP3 347 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 PIK3C2GO75747 1445 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 PES1O00541 588 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 CLNS1AP54105 237 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
RFC1-201ENST00000349703 PPP2R5DQ14738 602 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 SYNE3Q6ZMZ3 975 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 RNF168Q8IYW5 571 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 MTFMTQ96DP5 389 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 ZSCAN10Q96SZ4 725 aaPredicted RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 SP110Q9HB58 689 aa6.81□□□□□ -1.32
RFC1-201ENST00000349703 HOOK1Q9UJC3 728 aaKnown RBP6.81□□□□□ -1.32
RFC1-201ENST00000349703 CARMIL2Q6F5E8 1435 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 PLCG1P19174 1290 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 FSHRP23945 695 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 EVI5LQ96CN4 794 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 FBXO9Q9UK97 447 aaPredicted RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 NUP160Q12769 1436 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 TDRD9Q8NDG6 1382 aaKnown RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 AMPHP49418 695 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 PDE4BQ07343 736 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms