RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TNS4Q8IZW8 715 aa19.66■□□□□ 0.74
RAB5C-201ENST00000346213 OPTNQ96CV9 577 aa19.66■□□□□ 0.74
RAB5C-201ENST00000346213 MS4A4AQ96JQ5 239 aa19.66■□□□□ 0.74
RAB5C-201ENST00000346213 WRNIP1Q96S55 665 aa19.66■□□□□ 0.74
RAB5C-201ENST00000346213 FAM196BA6NMK8 535 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 TBC1D8O95759 1140 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 DYNLL1P63167 89 aaKnown RBP19.65■□□□□ 0.74
RAB5C-201ENST00000346213 LRP2BPQ9P2M1 347 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 MAP3K9P80192 1104 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 BEGAINQ9BUH8 593 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 SAGE1Q9NXZ1 904 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 AATFQ9NY61 560 aaKnown RBP eCLIP19.65■□□□□ 0.74
RAB5C-201ENST00000346213 ZNF112Q9UJU3 913 aa19.65■□□□□ 0.74
RAB5C-201ENST00000346213 PHF20L1A8MW92 1017 aa19.64■□□□□ 0.73
RAB5C-201ENST00000346213 HMMRO75330 724 aa19.64■□□□□ 0.73
RAB5C-201ENST00000346213 CAP1Q01518 475 aa19.64■□□□□ 0.73
RAB5C-201ENST00000346213 RRP1BQ14684 758 aaKnown RBP19.64■□□□□ 0.73
RAB5C-201ENST00000346213 CASP8AP2Q9UKL3 1982 aa19.63■□□□□ 0.73
RAB5C-201ENST00000346213 ENTPD3O75355 529 aa19.63■□□□□ 0.73
RAB5C-201ENST00000346213 ZBTB48P10074 688 aaPredicted RBP19.63■□□□□ 0.73
RAB5C-201ENST00000346213 CDK5RAP2Q96SN8 1893 aa19.63■□□□□ 0.73
RAB5C-201ENST00000346213 CA12O43570 354 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 HSP90AB4PQ58FF6 505 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 TSHZ3Q63HK5 1081 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 NAA16Q6N069 864 aaPredicted RBP19.62■□□□□ 0.73
RAB5C-201ENST00000346213 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 OTUD5Q96G74 571 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 DCTPP1Q9H773 170 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 SPDYE5A6NIY4 337 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 RAB11FIP3O75154 756 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 SHROOM1Q2M3G4 852 aaPredicted RBP19.62■□□□□ 0.73
RAB5C-201ENST00000346213 CCDC84Q86UT8 332 aaPredicted RBP19.62■□□□□ 0.73
RAB5C-201ENST00000346213 IFNL1Q8IU54 200 aa19.62■□□□□ 0.73
RAB5C-201ENST00000346213 CLASRPQ8N2M8 674 aaKnown RBP19.62■□□□□ 0.73
RAB5C-201ENST00000346213 OTUD7AQ8TE49 926 aaPredicted RBP19.62■□□□□ 0.73
RAB5C-201ENST00000346213 UNCXA6NJT0 531 aa19.61■□□□□ 0.73
RAB5C-201ENST00000346213 IDH1O75874 414 aaKnown RBP19.61■□□□□ 0.73
RAB5C-201ENST00000346213 MAP3K10Q02779 954 aa19.61■□□□□ 0.73
RAB5C-201ENST00000346213 EVX2Q03828 476 aa19.61■□□□□ 0.73
RAB5C-201ENST00000346213 AAMPQ13685 434 aa19.61■□□□□ 0.73
RAB5C-201ENST00000346213 MIGA1Q8NAN2 632 aa19.61■□□□□ 0.73
RAB5C-201ENST00000346213 OSBPL5Q9H0X9 879 aaPredicted RBP19.61■□□□□ 0.73
RAB5C-201ENST00000346213 TESPA1A2RU30 521 aaPredicted RBP19.6■□□□□ 0.73
RAB5C-201ENST00000346213 MAGEB6Q8N7X4 407 aa19.6■□□□□ 0.73
RAB5C-201ENST00000346213 ZNF341Q9BYN7 854 aa19.6■□□□□ 0.73
RAB5C-201ENST00000346213 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
RAB5C-201ENST00000346213 IRF6O14896 467 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 PPP4CP60510 307 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 GSTO1P78417 241 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 JAG1P78504 1218 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 MOGSQ13724 837 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 SLF2Q8IX21 1173 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 TEX11Q8IYF3 940 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 BOLA2Q9H3K6 86 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 FLT1P17948 1338 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 FOCADQ5VW36 1801 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 TCRBV5S4A2TA0A5A2 114 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 GOLIM4O00461 696 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 IFIT2P09913 472 aaKnown RBP19.59■□□□□ 0.73
RAB5C-201ENST00000346213 CYP7A1P22680 504 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 MAPKAPK5Q8IW41 473 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 FAM43AQ8N2R8 423 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 DNAJC2Q99543 621 aaKnown RBP19.59■□□□□ 0.73
RAB5C-201ENST00000346213 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
RAB5C-201ENST00000346213 DDX60LQ5H9U9 1706 aaKnown RBP19.58■□□□□ 0.73
RAB5C-201ENST00000346213 COL2A1P02458 1487 aaPredicted RBP19.58■□□□□ 0.73
RAB5C-201ENST00000346213 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.72
RAB5C-201ENST00000346213 SLC4A8Q2Y0W8 1093 aa19.58■□□□□ 0.72
RAB5C-201ENST00000346213 TGFBRAP1Q8WUH2 860 aa19.58■□□□□ 0.72
RAB5C-201ENST00000346213 ZNF296Q8WUU4 475 aaPredicted RBP19.58■□□□□ 0.72
RAB5C-201ENST00000346213 RIOK1Q9BRS2 568 aaKnown RBP19.58■□□□□ 0.72
RAB5C-201ENST00000346213 CHMP4BQ9H444 224 aaKnown RBP19.58■□□□□ 0.72
RAB5C-201ENST00000346213 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
RAB5C-201ENST00000346213 CAPN15O75808 1086 aa19.57■□□□□ 0.72
RAB5C-201ENST00000346213 LDHCP07864 332 aa19.57■□□□□ 0.72
RAB5C-201ENST00000346213 SREBF2Q12772 1141 aa19.57■□□□□ 0.72
RAB5C-201ENST00000346213 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
RAB5C-201ENST00000346213 DCAF15Q66K64 600 aa19.57■□□□□ 0.72
RAB5C-201ENST00000346213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.57■□□□□ 0.72
RAB5C-201ENST00000346213 CSADQ9Y600 493 aa19.57■□□□□ 0.72
RAB5C-201ENST00000346213 PDE6AP16499 860 aa19.56■□□□□ 0.72
RAB5C-201ENST00000346213 ATP5JP18859 108 aa19.56■□□□□ 0.72
RAB5C-201ENST00000346213 ERO1BQ86YB8 467 aa19.56■□□□□ 0.72
RAB5C-201ENST00000346213 ZSCAN29Q8IWY8 852 aaPredicted RBP19.56■□□□□ 0.72
RAB5C-201ENST00000346213 CFHR5Q9BXR6 569 aa19.56■□□□□ 0.72
RAB5C-201ENST00000346213 MCOLN1Q9GZU1 580 aa19.56■□□□□ 0.72
RAB5C-201ENST00000346213 REM2Q8IYK8 340 aaPredicted RBP19.56■□□□□ 0.72
RAB5C-201ENST00000346213 PHIPQ8WWQ0 1821 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 CCL15-CCL14A0A0B4J2E2 113 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 GPR25O00155 361 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 CRHR2Q13324 411 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 CCL15Q16663 113 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 CENPQQ7L2Z9 268 aaPredicted RBP19.55■□□□□ 0.72
RAB5C-201ENST00000346213 HAUS7Q99871 368 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 SAP30BPQ9UHR5 308 aaKnown RBP19.55■□□□□ 0.72
RAB5C-201ENST00000346213 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
RAB5C-201ENST00000346213 SMIM22K7EJ46 135 aa19.54■□□□□ 0.72
RAB5C-201ENST00000346213 PPIL2Q13356 520 aa19.54■□□□□ 0.72
RAB5C-201ENST00000346213 CENPFP49454 3210 aa19.54■□□□□ 0.72
RAB5C-201ENST00000346213 AK9Q5TCS8 1911 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms