RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 RBBP6Q7Z6E9 1792 aaKnown RBP15.29■□□□□ 0.04
SGCA-202ENST00000344627 GAKO14976 1311 aa15.29■□□□□ 0.04
SGCA-202ENST00000344627 MAP3K10Q02779 954 aa15.29■□□□□ 0.04
SGCA-202ENST00000344627 SLC4A8Q2Y0W8 1093 aa15.29■□□□□ 0.04
SGCA-202ENST00000344627 ERICH6Q7L0X2 663 aa15.29■□□□□ 0.04
SGCA-202ENST00000344627 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
SGCA-202ENST00000344627 TBC1D2Q9BYX2 928 aa15.29■□□□□ 0.04
SGCA-202ENST00000344627 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
SGCA-202ENST00000344627 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
SGCA-202ENST00000344627 PDHXO00330 501 aa15.28■□□□□ 0.04
SGCA-202ENST00000344627 NFIAQ12857 509 aa15.28■□□□□ 0.04
SGCA-202ENST00000344627 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.28■□□□□ 0.04
SGCA-202ENST00000344627 PICK1Q9NRD5 415 aa15.28■□□□□ 0.04
SGCA-202ENST00000344627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
SGCA-202ENST00000344627 HTTP42858 3142 aa15.28■□□□□ 0.04
SGCA-202ENST00000344627 SURF6O75683 361 aaKnown RBP15.27■□□□□ 0.04
SGCA-202ENST00000344627 LDHCP07864 332 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 EN2P19622 333 aaPredicted RBP15.27■□□□□ 0.04
SGCA-202ENST00000344627 INPP5BP32019 993 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 GSTO1P78417 241 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 ATP8B2P98198 1209 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 FAM198AQ9UFP1 575 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
SGCA-202ENST00000344627 TBC1D12O60347 775 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
SGCA-202ENST00000344627 RLBP1P12271 317 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 SPATA5Q8NB90 893 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 HMG20BQ9P0W2 317 aa15.26■□□□□ 0.03
SGCA-202ENST00000344627 UQCRFS1P1P0C7P4 283 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 BTDP43251 543 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 PSMC4P43686 418 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 RGS3P49796 1198 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 FCGRTP55899 365 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 UBXN2AP68543 259 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 MECOMQ03112 1051 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 PICALMQ13492 652 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 ZFPM1Q8IX07 1006 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 RAET1EQ8TD07 263 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 PANK1Q8TE04 598 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 LRP2BPQ9P2M1 347 aa15.25■□□□□ 0.03
SGCA-202ENST00000344627 MROH7-TTC4A0A0A0MT08 1334 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 ADGRA2Q96PE1 1338 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 A0A0G2JLL6 359 aaPredicted RBP15.24■□□□□ 0.03
SGCA-202ENST00000344627 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
SGCA-202ENST00000344627 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
SGCA-202ENST00000344627 POLA2Q14181 598 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 HABP4Q5JVS0 413 aaKnown RBP15.24■□□□□ 0.03
SGCA-202ENST00000344627 CCDC158Q5M9N0 1113 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 PRRT2Q7Z6L0 340 aaPredicted RBP15.24■□□□□ 0.03
SGCA-202ENST00000344627 SLAIN1Q8ND83 568 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 SSH3Q8TE77 659 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 SNRKQ9NRH2 765 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
SGCA-202ENST00000344627 GPR75-ASB3A0A0A6YYF3 556 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 PTPRAP18433 802 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 GRK4P32298 578 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 CAP1Q01518 475 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 MOGSQ13724 837 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 CPA4Q9UI42 421 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 PNMA3Q9UL41 463 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 AFG3L2Q9Y4W6 797 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 RFX7Q2KHR2 1363 aa15.23■□□□□ 0.03
SGCA-202ENST00000344627 MYPNQ86TC9 1320 aa15.22■□□□□ 0.03
SGCA-202ENST00000344627 COL2A1P02458 1487 aaPredicted RBP15.22■□□□□ 0.03
SGCA-202ENST00000344627 GJB1P08034 283 aa15.22■□□□□ 0.03
SGCA-202ENST00000344627 BCRP11274 1271 aa15.22■□□□□ 0.03
SGCA-202ENST00000344627 OSBPP22059 807 aa15.22■□□□□ 0.03
SGCA-202ENST00000344627 ARID4AP29374 1257 aaPredicted RBP15.22■□□□□ 0.03
SGCA-202ENST00000344627 MCAMP43121 646 aa15.22■□□□□ 0.03
SGCA-202ENST00000344627 PABPC4Q13310 644 aaKnown RBP eCLIP15.22■□□□□ 0.03
SGCA-202ENST00000344627 DBNDD2Q9BQY9 259 aa15.22■□□□□ 0.03
SGCA-202ENST00000344627 NOL10Q9BSC4 688 aaKnown RBP15.22■□□□□ 0.03
SGCA-202ENST00000344627 OSBPL5Q9H0X9 879 aaPredicted RBP15.22■□□□□ 0.03
SGCA-202ENST00000344627 CENPFP49454 3210 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 MS4A1P11836 297 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 GJA8P48165 433 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 IRF5Q13568 498 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 GPAT2Q6NUI2 795 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
SGCA-202ENST00000344627 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 HTATIP2Q9BUP3 242 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 CCDC8Q9H0W5 538 aaPredicted RBP15.21■□□□□ 0.03
SGCA-202ENST00000344627 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 GPR108Q9NPR9 543 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 DOCK2Q92608 1830 aa15.21■□□□□ 0.03
SGCA-202ENST00000344627 PLCG2P16885 1265 aa15.2■□□□□ 0.02
SGCA-202ENST00000344627 TMED8Q6PL24 325 aaPredicted RBP15.2■□□□□ 0.02
SGCA-202ENST00000344627 NSUN4Q96CB9 384 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms