RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TMCO5BA8MYB1 307 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 GNA11P29992 359 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 ELF2Q15723 593 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 TAX1BP1Q86VP1 789 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 KIAA1524Q8TCG1 905 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 CARD6Q9BX69 1037 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 ANKRD2Q9GZV1 360 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 NRBP1Q9UHY1 535 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 A0A1W2PQ27 194 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 A0A1W2PQ64 194 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 A0A1W2PQD8 194 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 HIBADHP31937 336 aaKnown RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 KRT83P78385 493 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 PI16Q6UXB8 463 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 CUL5Q93034 780 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 RDXP35241 583 aaKnown RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 TTC38Q5R3I4 469 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 WWC2Q6AWC2 1192 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 IFNL3Q8IZI9 196 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 NAA15Q9BXJ9 866 aaKnown RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 POSTNQ15063 836 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 CTR9Q6PD62 1173 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 TRMT1LQ7Z2T5 733 aaKnown RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 NOSTRINQ8IVI9 506 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 MROH5Q6ZUA9 1318 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 A0A087WWV3 80 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 PDE8BO95263 885 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 PHKA1P46020 1223 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 NDUFA8P51970 172 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 PICALMQ13492 652 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 PNOCQ13519 176 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 ZNF654Q8IZM8 581 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 OSBP2Q969R2 916 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 ZBTB9Q96C00 473 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 VPS54Q9P1Q0 977 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 SERTAD1Q9UHV2 236 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 ZNF215Q9UL58 517 aaPredicted RBP8.14□□□□□ -1.11
VCAN-202ENST00000342785 TACC1O75410 805 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 CTSWP56202 376 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 TMEM132AQ24JP5 1023 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 LETM2Q2VYF4 491 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 RTEL1Q9NZ71 1219 aa8.14□□□□□ -1.11
VCAN-202ENST00000342785 MED14O60244 1454 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 SHTN1A0MZ66 631 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 CKAP4Q07065 602 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 UBE3CQ15386 1083 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 TMEM87AQ8NBN3 555 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 GREM2Q9H772 168 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 CYP2E1P05181 493 aaPredicted RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 RHOXF2BP0C7M4 288 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 PPP2R3AQ06190 1150 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 ZNF827Q17R98 1081 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 ZNF804AQ7Z570 1209 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 FANCBQ8NB91 859 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 RHOXF2Q9BQY4 288 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 PHACTR2O75167 634 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 CMTR1Q8N1G2 835 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 CACTINQ8WUQ7 758 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 PDLIM2Q96JY6 352 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 GTPBP4Q9BZE4 634 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 PCDHA5Q9Y5H7 936 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 USP17L21D6R901 530 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 HMGB2P26583 209 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 KRT9P35527 623 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 RRP36Q96EU6 259 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 TTC14Q96N46 770 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 ASAP1Q9ULH1 1129 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 CLIC4Q9Y696 253 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 HECW2Q9P2P5 1572 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 PLCG2P16885 1265 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 ETF1P62495 437 aaKnown RBP8.13□□□□□ -1.11
VCAN-202ENST00000342785 SLC39A14Q15043 492 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 APOA5Q6Q788 366 aa8.13□□□□□ -1.11
VCAN-202ENST00000342785 BICDL2A1A5D9 508 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 CYP27B1O15528 508 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 CIAO1O76071 339 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 MAPK8IP2Q13387 824 aaPredicted RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 CCDC122Q5T0U0 273 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 LRRC8AQ8IWT6 810 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 CLIC6Q96NY7 704 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 ZC3H12CQ9C0D7 883 aaKnown RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 GPHNQ9NQX3 736 aaPredicted RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 AXIN2Q9Y2T1 843 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 TMEM94Q12767 1356 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 TBCAO75347 108 aaKnown RBP8.12□□□□□ -1.11
VCAN-202ENST00000342785 TNIP1Q15025 636 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 SPECC1LQ69YQ0 1117 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 ERMNQ8TAM6 284 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 FANCLQ9NW38 375 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 TFCP2L1Q9NZI6 479 aa8.12□□□□□ -1.11
VCAN-202ENST00000342785 TULP4Q9NRJ4 1543 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms