RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 PIK3AP1Q6ZUJ8 805 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 CPLX4Q7Z7G2 160 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 UBLCP1Q8WVY7 318 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-201ENST00000341947 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 ZMYND15Q9H091 742 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 DDX21Q9NR30 783 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL11A2-201ENST00000341947 SAMD15Q9P1V8 674 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 NCKAP5LQ9HCH0 1330 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 PDE8AO60658 829 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 ZBED4O75132 1171 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 ATP5DP30049 168 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 MYL5Q02045 173 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 UAP1Q16222 522 aaPredicted RBP17.04■□□□□ 0.32
COL11A2-201ENST00000341947 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 A0A1B0GUL7 405 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 NOL3O60936 208 aaKnown RBP17.04■□□□□ 0.32
COL11A2-201ENST00000341947 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
COL11A2-201ENST00000341947 TRIM14Q14142 442 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 GEN1Q17RS7 908 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 GPATCH11Q8N954 259 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 VAMP4O75379 141 aa17.04■□□□□ 0.32
COL11A2-201ENST00000341947 RHOXF2BP0C7M4 288 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 RHOXF2Q9BQY4 288 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 ASIC2Q16515 512 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
COL11A2-201ENST00000341947 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 INTS4Q96HW7 963 aaKnown RBP17.03■□□□□ 0.32
COL11A2-201ENST00000341947 GABPB2Q8TAK5 448 aaPredicted RBP17.03■□□□□ 0.32
COL11A2-201ENST00000341947 CCDC110Q8TBZ0 833 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 H0YIN7 160 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 RPS6KB1P23443 525 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 CLUL1Q15846 466 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 ZYXQ15942 572 aaKnown RBP17.03■□□□□ 0.32
COL11A2-201ENST00000341947 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 AZI2Q9H6S1 392 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 NKIRAS1Q9NYS0 192 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
COL11A2-201ENST00000341947 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
COL11A2-201ENST00000341947 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
COL11A2-201ENST00000341947 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
COL11A2-201ENST00000341947 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
COL11A2-201ENST00000341947 BAG1Q99933 345 aaPredicted RBP17.02■□□□□ 0.32
COL11A2-201ENST00000341947 PFDN4Q9NQP4 134 aa17.02■□□□□ 0.31
COL11A2-201ENST00000341947 ASXL2Q76L83 1435 aa17.02■□□□□ 0.31
COL11A2-201ENST00000341947 EIF2AK4Q9P2K8 1649 aaKnown RBP17.02■□□□□ 0.31
COL11A2-201ENST00000341947 ADCY7P51828 1080 aa17.02■□□□□ 0.31
COL11A2-201ENST00000341947 PDE6BP35913 854 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 TBC1D8BQ0IIM8 1120 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 TUBBP07437 444 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 TXKP42681 527 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 SYT10Q6XYQ8 523 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
COL11A2-201ENST00000341947 M0QZ92 97 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 PLEKHM2Q8IWE5 1019 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 CAPN2P17655 700 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 VPS18Q9P253 973 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 GINS2Q9Y248 185 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
COL11A2-201ENST00000341947 ZEB2O60315 1214 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 UBL4BQ8N7F7 174 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 STIM2Q9P246 746 aa17.01■□□□□ 0.31
COL11A2-201ENST00000341947 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
COL11A2-201ENST00000341947 LPXNO60711 386 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 CETN3O15182 167 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 DNM2P50570 870 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 NACA2Q9H009 215 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
COL11A2-201ENST00000341947 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
COL11A2-201ENST00000341947 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 ITSN2Q9NZM3 1697 aa17■□□□□ 0.31
COL11A2-201ENST00000341947 CIB2O75838 187 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 RFX1P22670 979 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL11A2-201ENST00000341947 GABPAQ06546 454 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 APPBP2Q92624 585 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 DNAJC21Q5F1R6 531 aaKnown RBP16.99■□□□□ 0.31
COL11A2-201ENST00000341947 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 ZKSCAN5Q9Y2L8 839 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 EBAG9O00559 213 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 SLC1A4P43007 532 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 ANO1Q5XXA6 986 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 ZNF365Q70YC5 407 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 INTS8Q75QN2 995 aaKnown RBP16.99■□□□□ 0.31
COL11A2-201ENST00000341947 IGSF22Q8N9C0 903 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 TBC1D31Q96DN5 1066 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 HAUS2Q9NVX0 235 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 ITIH3Q06033 890 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 CYP26C1Q6V0L0 522 aa16.99■□□□□ 0.31
COL11A2-201ENST00000341947 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms