RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 DDX12PQ92771 950 aa15.47■□□□□ 0.07
RTN4-202ENST00000337526 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
RTN4-202ENST00000337526 XPO4Q9C0E2 1151 aaKnown RBP15.47■□□□□ 0.07
RTN4-202ENST00000337526 GRIPAP1Q4V328 841 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 RGS22Q8NE09 1264 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 IL17REQ8NFR9 667 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 FBF1Q8TES7 1133 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 NSRP1Q9H0G5 558 aaKnown RBP15.46■□□□□ 0.07
RTN4-202ENST00000337526 ADALQ6DHV7 355 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 CSGALNACT2Q8N6G5 542 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 A0A0D9SFI3 127 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 NR1I2O75469 434 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 TUBB2AQ13885 445 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 CYP26C1Q6V0L0 522 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 C10orf67Q8IYJ2 551 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 ZSWIM6Q9HCJ5 1215 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 TPCN1Q9ULQ1 816 aa15.46■□□□□ 0.07
RTN4-202ENST00000337526 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 ZAP70P43403 619 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 CPLX4Q7Z7G2 160 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 KIAA1468Q9P260 1216 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 PLEKHG3A1L390 1219 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 UBAP1LF5GYI3 381 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 FAM13AO94988 1023 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 KIF4AO95239 1232 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 USP28Q96RU2 1077 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 PAIP2Q9BPZ3 127 aaKnown RBP15.45■□□□□ 0.06
RTN4-202ENST00000337526 ANKRD2Q9GZV1 360 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 BCL2L12Q9HB09 334 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 POSTNQ15063 836 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 TTC6Q86TZ1 520 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 TMTC1Q8IUR5 882 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 TSGA10Q9BZW7 698 aa15.45■□□□□ 0.06
RTN4-202ENST00000337526 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
RTN4-202ENST00000337526 PAK1Q13153 545 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 MTX1Q13505 466 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 CCDC121Q6ZUS5 278 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 ANKS4BQ8N8V4 417 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 PDE8AO60658 829 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 NF2P35240 595 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 LRMPQ12912 555 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 ORAI2Q96SN7 254 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 KCNJ14Q9UNX9 436 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 NEURL1BA8MQ27 555 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 RPL13P26373 211 aaKnown RBP15.44■□□□□ 0.06
RTN4-202ENST00000337526 RAPGEF1Q13905 1077 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 CCDC65Q8IXS2 484 aa15.44■□□□□ 0.06
RTN4-202ENST00000337526 STMN4Q9H169 189 aaPredicted RBP15.44■□□□□ 0.06
RTN4-202ENST00000337526 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
RTN4-202ENST00000337526 CD2BP2O95400 341 aaKnown RBP15.44■□□□□ 0.06
RTN4-202ENST00000337526 GTF2A1P52655 376 aaPredicted RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 MRPL12P52815 198 aaKnown RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 PPP2R5BQ15173 497 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 LPIN2Q92539 896 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 GABPB1Q06547 395 aaPredicted RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 ZNF274Q96GC6 653 aaPredicted RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 IBTKQ9P2D0 1353 aaPredicted RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 TRMT44Q8IYL2 757 aaKnown RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 STAMQ92783 540 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 SELENOSQ9BQE4 189 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 SMIM23A6NLE4 172 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 TMEM110-MUSTN1A8MSY1 372 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 KCNQ3O43525 872 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 PLCB3Q01970 1234 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 RASEFQ8IZ41 740 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 PPP1R14CQ8TAE6 165 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 SEC62Q99442 399 aaKnown RBP15.43■□□□□ 0.06
RTN4-202ENST00000337526 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 SYNCQ9H7C4 482 aa15.43■□□□□ 0.06
RTN4-202ENST00000337526 ZNF532Q9HCE3 1301 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 C6orf163Q5TEZ5 329 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 CNNM4Q6P4Q7 775 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 TCHPQ9BT92 498 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 TAF5LO75529 589 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 STAMBPO95630 424 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 IQCGQ9H095 443 aaKnown RBP15.42■□□□□ 0.06
RTN4-202ENST00000337526 TAB2Q9NYJ8 693 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 PARP10Q53GL7 1025 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 BEND3Q5T5X7 828 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 OGFOD1Q8N543 542 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 MTRF1LQ9UGC7 380 aaKnown RBP15.42■□□□□ 0.06
RTN4-202ENST00000337526 STAP2Q9UGK3 403 aa15.42■□□□□ 0.06
RTN4-202ENST00000337526 ATP2A1O14983 1001 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 KRBA2Q6ZNG9 492 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 C8orf74Q6P047 294 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 OSBPL3Q9H4L5 887 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
RTN4-202ENST00000337526 ARHGEF10O15013 1369 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 EEF2P13639 858 aaKnown RBP15.41■□□□□ 0.06
RTN4-202ENST00000337526 HIBADHP31937 336 aaKnown RBP15.41■□□□□ 0.06
RTN4-202ENST00000337526 GJC1P36383 396 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms