RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 UQCRHP07919 91 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 ARID4AP29374 1257 aaPredicted RBP18.54■□□□□ 0.56
PDGFB-201ENST00000331163 UIMC1Q96RL1 719 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 ECE2O60344 883 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 IFIT1BQ5T764 474 aaKnown RBP18.54■□□□□ 0.56
PDGFB-201ENST00000331163 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
PDGFB-201ENST00000331163 TDRD3Q9H7E2 651 aaKnown RBP18.54■□□□□ 0.56
PDGFB-201ENST00000331163 PDE4BQ07343 736 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 NIM1KQ8IY84 436 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 ESR2Q92731 530 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 DSCC1Q9BVC3 393 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 ZBTB43O43298 467 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 TFAP4Q01664 338 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 GPR162Q16538 588 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 DALRD3Q5D0E6 543 aaKnown RBP18.53■□□□□ 0.56
PDGFB-201ENST00000331163 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.53■□□□□ 0.56
PDGFB-201ENST00000331163 SNX21Q969T3 373 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 SENP2Q9HC62 589 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
PDGFB-201ENST00000331163 STX6O43752 255 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
PDGFB-201ENST00000331163 GOLGA8HP0CJ92 632 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 ZSWIM5Q9P217 1185 aa18.53■□□□□ 0.56
PDGFB-201ENST00000331163 GSG1L2A8MUP6 293 aa18.52■□□□□ 0.56
PDGFB-201ENST00000331163 GSTO1P78417 241 aa18.52■□□□□ 0.56
PDGFB-201ENST00000331163 CACNA1FO60840 1977 aa18.52■□□□□ 0.56
PDGFB-201ENST00000331163 SYT1P21579 422 aa18.52■□□□□ 0.55
PDGFB-201ENST00000331163 AKNAD1Q5T1N1 836 aa18.52■□□□□ 0.55
PDGFB-201ENST00000331163 PRAMEF18Q5VWM3 479 aa18.52■□□□□ 0.55
PDGFB-201ENST00000331163 MIGA2Q7L4E1 593 aa18.52■□□□□ 0.55
PDGFB-201ENST00000331163 NSUN4Q96CB9 384 aaKnown RBP18.52■□□□□ 0.55
PDGFB-201ENST00000331163 ZSWIM6Q9HCJ5 1215 aa18.52■□□□□ 0.55
PDGFB-201ENST00000331163 CCDC96Q2M329 555 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 ZSCAN31Q96LW9 406 aaPredicted RBP18.51■□□□□ 0.55
PDGFB-201ENST00000331163 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
PDGFB-201ENST00000331163 SP8Q8IXZ3 490 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 AIFM3Q96NN9 605 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 RNF41Q9H4P4 317 aaPredicted RBP18.51■□□□□ 0.55
PDGFB-201ENST00000331163 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 PTPDC1A2A3K4 754 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 TEKT1Q969V4 418 aa18.51■□□□□ 0.55
PDGFB-201ENST00000331163 EPB41L4AQ9HCS5 686 aaPredicted RBP18.51■□□□□ 0.55
PDGFB-201ENST00000331163 ZHX1Q9UKY1 873 aaPredicted RBP18.51■□□□□ 0.55
PDGFB-201ENST00000331163 NEDD4P46934 1319 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 USP17L4A6NCW7 530 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 DNM1Q05193 864 aaKnown RBP18.5■□□□□ 0.55
PDGFB-201ENST00000331163 USP17L1Q7RTZ2 530 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 CNPY2Q9Y2B0 182 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 RASSF8Q8NHQ8 419 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
PDGFB-201ENST00000331163 CYB5R4Q7L1T6 521 aa18.49■□□□□ 0.55
PDGFB-201ENST00000331163 SLF2Q8IX21 1173 aa18.49■□□□□ 0.55
PDGFB-201ENST00000331163 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
PDGFB-201ENST00000331163 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
PDGFB-201ENST00000331163 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 TRIM22Q8IYM9 498 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 SH2B1Q9NRF2 756 aaPredicted RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 RASSF7Q02833 373 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 CATIPQ7Z7H3 387 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 RBSNQ9H1K0 784 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 KAT14Q9H8E8 782 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 GNAT2P19087 354 aa18.48■□□□□ 0.55
PDGFB-201ENST00000331163 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 ANGEL1Q9UNK9 670 aaKnown RBP18.48■□□□□ 0.55
PDGFB-201ENST00000331163 OFD1O75665 1012 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 DLGAP5Q15398 846 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
PDGFB-201ENST00000331163 SYCE3A1L190 88 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 GDF11O95390 407 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 SCRN1Q12765 414 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
PDGFB-201ENST00000331163 CAMK4Q16566 473 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 LRRC47Q8N1G4 583 aaKnown RBP18.47■□□□□ 0.55
PDGFB-201ENST00000331163 TSC1Q92574 1164 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 KRT23Q9C075 422 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 ZNF408Q9H9D4 720 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 CDC37L1Q7L3B6 337 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 TAF1P21675 1872 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 TNKSO95271 1327 aa18.47■□□□□ 0.55
PDGFB-201ENST00000331163 ZSCAN23Q3MJ62 389 aa18.46■□□□□ 0.55
PDGFB-201ENST00000331163 TRMT1LQ7Z2T5 733 aaKnown RBP18.46■□□□□ 0.55
PDGFB-201ENST00000331163 GPCPD1Q9NPB8 672 aa18.46■□□□□ 0.55
PDGFB-201ENST00000331163 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.55
PDGFB-201ENST00000331163 UBE2Q2LH0YL09 131 aa18.46■□□□□ 0.55
PDGFB-201ENST00000331163 ME1P48163 572 aa18.46■□□□□ 0.55
PDGFB-201ENST00000331163 GRM1Q13255 1194 aa18.46■□□□□ 0.55
PDGFB-201ENST00000331163 TOB2Q14106 344 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms