RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MOGSQ13724 837 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
TPM3-204ENST00000323144 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 ZGPATQ8N5A5 531 aaKnown RBP15.27■□□□□ 0.04
TPM3-204ENST00000323144 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 EFCC1Q9HA90 598 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 PTCH2Q9Y6C5 1203 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.03
TPM3-204ENST00000323144 MYH1P12882 1939 aa15.26■□□□□ 0.03
TPM3-204ENST00000323144 DDTLA6NHG4 134 aaPredicted RBP15.26■□□□□ 0.03
TPM3-204ENST00000323144 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
TPM3-204ENST00000323144 RHBDL3P58872 404 aa15.26■□□□□ 0.03
TPM3-204ENST00000323144 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
TPM3-204ENST00000323144 IDI2Q9BXS1 227 aa15.26■□□□□ 0.03
TPM3-204ENST00000323144 AKAP2Q9Y2D5 859 aa15.26■□□□□ 0.03
TPM3-204ENST00000323144 PPATQ06203 517 aa15.25■□□□□ 0.03
TPM3-204ENST00000323144 POLA2Q14181 598 aa15.25■□□□□ 0.03
TPM3-204ENST00000323144 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
TPM3-204ENST00000323144 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
TPM3-204ENST00000323144 KCNH4Q9UQ05 1017 aa15.25■□□□□ 0.03
TPM3-204ENST00000323144 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 ENTPD3O75355 529 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 CTGFP29279 349 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 DIEXFQ68CQ4 756 aaKnown RBP15.24■□□□□ 0.03
TPM3-204ENST00000323144 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 ZSCAN29Q8IWY8 852 aaPredicted RBP15.24■□□□□ 0.03
TPM3-204ENST00000323144 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
TPM3-204ENST00000323144 SCYL3Q8IZE3 742 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 ARMC5Q96C12 935 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
TPM3-204ENST00000323144 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
TPM3-204ENST00000323144 ZCCHC17Q9NP64 241 aaKnown RBP15.24■□□□□ 0.03
TPM3-204ENST00000323144 TLR7Q9NYK1 1049 aaKnown RBP15.24■□□□□ 0.03
TPM3-204ENST00000323144 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 TLR2O60603 784 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 LACTBP83111 547 aaPredicted RBP15.23■□□□□ 0.03
TPM3-204ENST00000323144 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 CPA4Q9UI42 421 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
TPM3-204ENST00000323144 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
TPM3-204ENST00000323144 PDHXO00330 501 aa15.22■□□□□ 0.03
TPM3-204ENST00000323144 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.038e-7■■□□□ 13.8
TPM3-204ENST00000323144 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
TPM3-204ENST00000323144 ANKRD23Q86SG2 305 aa15.22■□□□□ 0.03
TPM3-204ENST00000323144 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
TPM3-204ENST00000323144 FAM163AQ96GL9 167 aaPredicted RBP15.22■□□□□ 0.03
TPM3-204ENST00000323144 ZNF333Q96JL9 665 aa15.22■□□□□ 0.03
TPM3-204ENST00000323144 RAI14Q9P0K7 980 aa15.22■□□□□ 0.03
TPM3-204ENST00000323144 MYH7P12883 1935 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 SLC34A2O95436 690 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 OS9Q13438 667 aaPredicted RBP15.21■□□□□ 0.03
TPM3-204ENST00000323144 GPAT2Q6NUI2 795 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 ADGRA1Q86SQ6 560 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 SLF2Q8IX21 1173 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 PLXNB2O15031 1838 aa15.21■□□□□ 0.03
TPM3-204ENST00000323144 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 MYCP01106 439 aaPredicted RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 CYP2C8P10632 490 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 PTPRAP18433 802 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 TTC39AQ5SRH9 613 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 PRPF38BQ5VTL8 546 aaKnown RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 C17orf99Q6UX52 265 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 PANK1Q8TE04 598 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 SH3RF3Q8TEJ3 882 aaPredicted RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 TRIM47Q96LD4 638 aa15.2■□□□□ 0.02
TPM3-204ENST00000323144 OSBPL5Q9H0X9 879 aaPredicted RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 DBNLQ9UJU6 430 aaKnown RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 KIAA0100Q14667 2235 aaKnown RBP15.2■□□□□ 0.02
TPM3-204ENST00000323144 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
TPM3-204ENST00000323144 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
TPM3-204ENST00000323144 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
TPM3-204ENST00000323144 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
TPM3-204ENST00000323144 PIH1D3Q9NQM4 214 aaKnown RBP15.19■□□□□ 0.02
TPM3-204ENST00000323144 PICK1Q9NRD5 415 aa15.19■□□□□ 0.02
TPM3-204ENST00000323144 MYH8P13535 1937 aa15.19■□□□□ 0.02
TPM3-204ENST00000323144 TRIM75PA6NK02 468 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 SURF6O75683 361 aaKnown RBP15.18■□□□□ 0.02
TPM3-204ENST00000323144 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
TPM3-204ENST00000323144 EN2P19622 333 aaPredicted RBP15.18■□□□□ 0.02
TPM3-204ENST00000323144 GSTO1P78417 241 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 ATP8B2P98198 1209 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 MAP3K10Q02779 954 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 RRP1BQ14684 758 aaKnown RBP15.18■□□□□ 0.02
TPM3-204ENST00000323144 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
TPM3-204ENST00000323144 GPR108Q9NPR9 543 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
TPM3-204ENST00000323144 NDUFB9Q9Y6M9 179 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 ZHX2Q9Y6X8 837 aa15.18■□□□□ 0.02
TPM3-204ENST00000323144 FLT1P17948 1338 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 ZBTB7BO15156 539 aaPredicted RBP15.17■□□□□ 0.02
TPM3-204ENST00000323144 BCRP11274 1271 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 OSBPP22059 807 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 ZAP70P43403 619 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms