RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TACO1Q9BSH4 297 aaKnown RBP18.73■□□□□ 0.59
PACS1-201ENST00000320580 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
PACS1-201ENST00000320580 IRX2Q9BZI1 471 aaPredicted RBP18.73■□□□□ 0.59
PACS1-201ENST00000320580 USP44Q9H0E7 712 aa18.73■□□□□ 0.59
PACS1-201ENST00000320580 TMEM232C9JQI7 657 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 GOLGA8KD6RF30 607 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 NCAPH2Q6IBW4 605 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
PACS1-201ENST00000320580 VSNL1P62760 191 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 MLKLQ8NB16 471 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 BTBD11A6QL63 1104 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 MTIF2P46199 727 aaKnown RBP18.72■□□□□ 0.59
PACS1-201ENST00000320580 ZRSR2Q15696 482 aaKnown RBP18.72■□□□□ 0.59
PACS1-201ENST00000320580 C8orf74Q6P047 294 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 CHPF2Q9P2E5 772 aa18.72■□□□□ 0.59
PACS1-201ENST00000320580 ACEP12821 1306 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 WWC3Q9ULE0 1092 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 SLC8A1P32418 973 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 SCRN1Q12765 414 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 PPP1R7Q15435 360 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 TTC5Q8N0Z6 440 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 ELF1P32519 619 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 SSRP1Q08945 709 aaKnown RBP18.71■□□□□ 0.59
PACS1-201ENST00000320580 LRRC31Q6UY01 552 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 CACNA2D4Q7Z3S7 1137 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 MAP4K1Q92918 833 aa18.71■□□□□ 0.59
PACS1-201ENST00000320580 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
PACS1-201ENST00000320580 SEC62Q99442 399 aaKnown RBP18.71■□□□□ 0.59
PACS1-201ENST00000320580 POLR2DO15514 142 aaKnown RBP18.7■□□□□ 0.58
PACS1-201ENST00000320580 ZRANB2O95218 330 aaKnown RBP eCLIP18.7■□□□□ 0.58
PACS1-201ENST00000320580 KRI1Q8N9T8 703 aaKnown RBP18.7■□□□□ 0.58
PACS1-201ENST00000320580 PRC1O43663 620 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 MYO1BO43795 1136 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 CCDC42Q96M95 316 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.7■□□□□ 0.58
PACS1-201ENST00000320580 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 A0A1W2PQ27 194 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 A0A1W2PQ64 194 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 A0A1W2PQD8 194 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 RXRAP19793 462 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 PDCLQ13371 301 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
PACS1-201ENST00000320580 GIGYF2Q6Y7W6 1299 aaKnown RBP18.7■□□□□ 0.58
PACS1-201ENST00000320580 NDUFB9Q9Y6M9 179 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 PDE6BP35913 854 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 PCDHA5Q9Y5H7 936 aa18.7■□□□□ 0.58
PACS1-201ENST00000320580 ACRBPQ8NEB7 543 aa18.69■□□□□ 0.58
PACS1-201ENST00000320580 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
PACS1-201ENST00000320580 TRIM47Q96LD4 638 aa18.69■□□□□ 0.58
PACS1-201ENST00000320580 PAIP2Q9BPZ3 127 aaKnown RBP18.69■□□□□ 0.58
PACS1-201ENST00000320580 SNRKQ9NRH2 765 aa18.69■□□□□ 0.58
PACS1-201ENST00000320580 GGCXP38435 758 aa18.69■□□□□ 0.58
PACS1-201ENST00000320580 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
PACS1-201ENST00000320580 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
PACS1-201ENST00000320580 METP08581 1390 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 CLSTN1O94985 981 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 CMA1P23946 247 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
PACS1-201ENST00000320580 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
PACS1-201ENST00000320580 IL25Q9H293 177 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 SF3B2Q13435 895 aaKnown RBP18.68■□□□□ 0.58
PACS1-201ENST00000320580 ZKSCAN8Q15776 578 aaPredicted RBP18.68■□□□□ 0.58
PACS1-201ENST00000320580 CCDC40Q4G0X9 1142 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 SELENOSQ9BQE4 189 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 ZFYVE9O95405 1425 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 RPGRIP1Q96KN7 1286 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
PACS1-201ENST00000320580 CLTAP09496 248 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 POSTNQ15063 836 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 DBF4Q9UBU7 674 aaPredicted RBP18.67■□□□□ 0.58
PACS1-201ENST00000320580 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 KIF1BO60333 1816 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 KCNJ6P48051 423 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 NECTIN1Q15223 517 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 RTEL1Q9NZ71 1219 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 AKAP2Q9Y2D5 859 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 CASP14P31944 242 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 TAB2Q9NYJ8 693 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 SYNRGQ9UMZ2 1314 aa18.67■□□□□ 0.58
PACS1-201ENST00000320580 TLDC2A0PJX2 215 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 RNASE9P60153 205 aaKnown RBP18.66■□□□□ 0.58
PACS1-201ENST00000320580 GSPT2Q8IYD1 628 aaKnown RBP18.66■□□□□ 0.58
PACS1-201ENST00000320580 DPF2Q92785 391 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.66■□□□□ 0.585e-6■■■■■ 34.6
PACS1-201ENST00000320580 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.66■□□□□ 0.58
PACS1-201ENST00000320580 PPRC1Q5VV67 1664 aaKnown RBP18.66■□□□□ 0.58
PACS1-201ENST00000320580 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 PFKFB2O60825 505 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 PCK1P35558 622 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 GUCY2FP51841 1108 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 CWF19L2Q2TBE0 894 aaKnown RBP18.66■□□□□ 0.58
PACS1-201ENST00000320580 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 VWA3AA6NCI4 1184 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 TMCO5BA8MYB1 307 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms