RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 ANKRD13DQ6ZTN6 518 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 KMT5BQ4FZB7 885 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 IFNKQ9P0W0 207 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 HMGB3O15347 200 aaKnown RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 ANKRD20A3Q5VUR7 823 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 VSIG1Q86XK7 387 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 SLC8A1P32418 973 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 PDCD2Q16342 344 aaPredicted RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 DRC3Q9H069 523 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 GOLGA8CPA6NN73 597 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 TNNI2P48788 182 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 HSP90AA5PQ58FG0 334 aa17.22■□□□□ 0.35
HCFC1-201ENST00000310441 TRMT1LQ7Z2T5 733 aaKnown RBP17.22■□□□□ 0.35
HCFC1-201ENST00000310441 GRM8O00222 908 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 GNA14O95837 355 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 STRN3Q13033 797 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 RAPGEF1Q13905 1077 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
HCFC1-201ENST00000310441 FAM212AQ96EL1 285 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 NOC4LQ9BVI4 516 aaKnown RBP17.21■□□□□ 0.35
HCFC1-201ENST00000310441 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
HCFC1-201ENST00000310441 RBM8AQ9Y5S9 174 aaKnown RBP17.21■□□□□ 0.35
HCFC1-201ENST00000310441 ERCC3P19447 782 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 FAM160A1Q05DH4 1040 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 RBSNQ9H1K0 784 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 PPFIA4O75335 1185 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
HCFC1-201ENST00000310441 ALDH1L1O75891 902 aa17.21■□□□□ 0.34
HCFC1-201ENST00000310441 ASIC2Q16515 512 aa17.21■□□□□ 0.34
HCFC1-201ENST00000310441 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
HCFC1-201ENST00000310441 EVI5O60447 810 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 SDSP20132 328 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
HCFC1-201ENST00000310441 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 DNM1Q05193 864 aaKnown RBP17.2■□□□□ 0.34
HCFC1-201ENST00000310441 BIRC3Q13489 604 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 DBN1Q16643 649 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 TMTC1Q8IUR5 882 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 ZC3H15Q8WU90 426 aaKnown RBP17.2■□□□□ 0.34
HCFC1-201ENST00000310441 RNF34Q969K3 372 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 HOOK2Q96ED9 719 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
HCFC1-201ENST00000310441 RNF40O75150 1001 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 F6X3S4 739 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 TNFAIP3P21580 790 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 INPP1P49441 399 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 PPP1R21Q6ZMI0 780 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 EPS15L1Q9UBC2 864 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
HCFC1-201ENST00000310441 RPS6KA2Q15349 733 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 SLC4A8Q2Y0W8 1093 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 PSPC1Q8WXF1 523 aaKnown RBP17.19■□□□□ 0.34
HCFC1-201ENST00000310441 CARD10Q9BWT7 1032 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 MIS12Q9H081 205 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 ABCC5O15440 1437 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 TRAF5O00463 557 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 HACE1Q8IYU2 909 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 GRK7Q8WTQ7 553 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 AFG3L2Q9Y4W6 797 aa17.19■□□□□ 0.34
HCFC1-201ENST00000310441 UTP14CQ5TAP6 766 aaKnown RBP17.18■□□□□ 0.34
HCFC1-201ENST00000310441 DHX32Q7L7V1 743 aaKnown RBP17.18■□□□□ 0.34
HCFC1-201ENST00000310441 BAG5Q9UL15 447 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 BACH1O14867 736 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 CCDC124Q96CT7 223 aaKnown RBP17.18■□□□□ 0.34
HCFC1-201ENST00000310441 PI4KAP2A4QPH2 592 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 PI4KAP1Q8N8J0 262 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 CABS1Q96KC9 395 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 SECISBP2LQ93073 1101 aaKnown RBP17.18■□□□□ 0.34
HCFC1-201ENST00000310441 TYW1Q9NV66 732 aaKnown RBP17.18■□□□□ 0.34
HCFC1-201ENST00000310441 ASIC3Q9UHC3 531 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 ORC6Q9Y5N6 252 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
HCFC1-201ENST00000310441 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
HCFC1-201ENST00000310441 PDE1AP54750 535 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 TRIM6Q9C030 488 aaPredicted RBP17.17■□□□□ 0.34
HCFC1-201ENST00000310441 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 GPTP24298 496 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 SYT10Q6XYQ8 523 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 HOMER3Q9NSC5 361 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 IPO11Q9UI26 975 aaKnown RBP17.17■□□□□ 0.34
HCFC1-201ENST00000310441 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
HCFC1-201ENST00000310441 ZBTB24O43167 697 aaPredicted RBP17.16■□□□□ 0.34
HCFC1-201ENST00000310441 COG7P83436 770 aa17.16■□□□□ 0.34
HCFC1-201ENST00000310441 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
HCFC1-201ENST00000310441 SLC9C2Q5TAH2 1124 aa17.16■□□□□ 0.34
HCFC1-201ENST00000310441 RUNDC3BQ96NL0 473 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms